CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_HAEIE (Valyl-tRNA synthetase OS=Haemophilus influenzae (strain PittEE) GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE SGYF + PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G+N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YQHWEESGYFKPSGNENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_HAEI8 (Valyl-tRNA synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE SGYF + PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G+N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YQHWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQAGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ERWCT (Valyl-tRNA synthetase OS=Erwinia carotovora subsp. atroseptica GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF +SK SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPHGNTSKESFSIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_COREF (Valyl-tRNA synthetase OS=Corynebacterium efficiens GN=valS PE=3 SV=2) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 47/80 (58.75%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y W ++GYF AD S KP + IVLPPPNVTG LH+GHAL + D + R +RM G+ LW+PGMDHAGIATQ VE+ L Sbjct: 34 YQGWVDAGYFTADPASEKPGYSIVLPPPNVTGQLHMGHALDHTLMDALARRKRMQGFEVLWLPGMDHAGIATQTKVEEML 113
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CARHZ (Valyl-tRNA synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=valS PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.491e-23 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY +WE +G+F + +P F IV+PPPNVTG LH+GHAL +QD + R++RM G+N LW+PG DHAGIATQ VE++L Sbjct: 18 WYKYWEENGFFHTEPDEREP-FCIVMPPPNVTGQLHMGHALDNTMQDILARYKRMQGFNTLWLPGTDHAGIATQAKVEEEL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_YERPS (Valyl-tRNA synthetase OS=Yersinia pseudotuberculosis GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + +SK S+ I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 29 YEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKI 108
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_YERPE (Valyl-tRNA synthetase OS=Yersinia pestis GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 46/80 (57.50%), Postives = 59/80 (73.75%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + +SK S+ I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 29 YEHWEKQGYFKPNGDTSKESYCIMIPPPNVTGSLHMGHAFQQTIMDTLIRYQRMQGKNTLWQAGTDHAGIATQMVVERKI 108
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SCHPO (Valyl-tRNA synthetase OS=Schizosaccharomyces pombe GN=vas2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 52/86 (60.47%), Postives = 59/86 (68.60%), Query Frame = 2 Query: 2 WYSWWENSGYFIA----DNKSSKPS-FVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WY WW SG+F D K K FVI PPPNVTGALHIGHALT AIQD++ RW RM G L++ G DHAG++TQ VVEKKL Sbjct: 106 WYDWWVKSGFFEPEFGPDGKPKKEGVFVITSPPPNVTGALHIGHALTIAIQDSLARWNRMLGKTVLFLGGFDHAGLSTQSVVEKKL 191
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SALTY (Valyl-tRNA synthetase OS=Salmonella typhimurium GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + SK SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SALTI (Valyl-tRNA synthetase OS=Salmonella typhi GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + SK SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |