CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SALPA (Valyl-tRNA synthetase OS=Salmonella paratyphi A GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + SK SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SALCH (Valyl-tRNA synthetase OS=Salmonella choleraesuis GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 47/80 (58.75%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + SK SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESKESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_HAEIN (Valyl-tRNA synthetase OS=Haemophilus influenzae GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 45/80 (56.25%), Postives = 57/80 (71.25%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE SGYF + PS+ I +PPPNVTG+LH+GHA + DT+IR+ RM G+N LW G DHAGIATQ+VVE+K+ Sbjct: 21 YQRWEESGYFKPSENENAPSYCIAIPPPNVTGSLHMGHAFQQTLMDTLIRFNRMEGHNTLWQTGTDHAGIATQMVVERKI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_CLOAB (Valyl-tRNA synthetase OS=Clostridium acetobutylicum GN=valS PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.109e-22 Identity = 44/80 (55.00%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WWE G+F +K + I++PPPN+TG LH+GHAL A+QD +IR +RM GY ALW+PG DHA IAT+V VEK++ Sbjct: 21 YKWWEEEGFFTPKVDKNKKPYTIMMPPPNITGKLHLGHALDCALQDFMIRAKRMQGYEALWLPGQDHASIATEVRVEKEI 100
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_THETN (Valyl-tRNA synthetase OS=Thermoanaerobacter tengcongensis GN=valS PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.448e-22 Identity = 45/80 (56.25%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 YS+W G+F + K F IV+PPPNVTG LH+GHAL +QD +IRWRRM GY ALW+PG DHA IAT++ V K+ Sbjct: 18 YSFWMEKGFFTPEIDPEKKPFTIVIPPPNVTGELHMGHALDNTLQDILIRWRRMQGYAALWIPGTDHASIATEIKVLDKI 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_NEIG1 (Valyl-tRNA synthetase OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=valS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.892e-22 Identity = 47/80 (58.75%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE+ GYF D +KPSF I LPPPNVTG LH+GHA I D + R+ RM G N W+PG DHAGIATQ+VVE++L Sbjct: 15 YQNWESQGYFRPDMDLTKPSFSIQLPPPNVTGTLHMGHAFNQTIMDGLTRYYRMKGCNTAWIPGTDHAGIATQIVVERQL 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BARHE (Valyl-tRNA synthetase OS=Bartonella henselae GN=valS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.892e-22 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 2 Query: 14 WENSGYFIAD--NKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 WE G F A +KS+ SF ++LPPPNVTG+LH+GHAL T IQD ++R++RM G N LW PGMDHAGIATQ+VVE++L Sbjct: 19 WEARGAFKAGMGSKSAAQSFCVMLPPPNVTGSLHMGHALNTTIQDIVVRFQRMRGKNVLWQPGMDHAGIATQMVVERQL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACHK (Valyl-tRNA synthetase OS=Bacillus thuringiensis subsp. konkukian GN=valS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.892e-22 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW YF A K + IV+PPPNVTG LH+GHA T +QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 22 YQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACCZ (Valyl-tRNA synthetase OS=Bacillus cereus (strain ZK / E33L) GN=valS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.892e-22 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW YF A K + IV+PPPNVTG LH+GHA T +QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 22 YQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACCR (Valyl-tRNA synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=valS PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.892e-22 Identity = 46/80 (57.50%), Postives = 54/80 (67.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WW YF A K + IV+PPPNVTG LH+GHA T +QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 22 YQWWLEGKYFEATGDEKKQPYTIVIPPPNVTGKLHLGHAWDTTLQDILTRTKRMQGYDVLWLPGMDHAGIATQAKVEGKL 101 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |