CF504388
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_SHIBS (Valyl-tRNA synthetase OS=Shigella boydii serotype 4 (strain Sb227) GN=valS PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.226e-22 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + S+ SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ECOLI (Valyl-tRNA synthetase OS=Escherichia coli (strain K12) GN=valS PE=1 SV=2) HSP 1 Score: 103.605 bits (257), Expect = 3.226e-22 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + S+ SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ECOL6 (Valyl-tRNA synthetase OS=Escherichia coli O6 GN=valS PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.226e-22 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + S+ SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_ECO57 (Valyl-tRNA synthetase OS=Escherichia coli O157:H7 GN=valS PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.226e-22 Identity = 46/80 (57.50%), Postives = 58/80 (72.50%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE GYF + S+ SF I++PPPNVTG+LH+GHA I DT+IR++RM G N LW G DHAGIATQ+VVE+K+ Sbjct: 15 YEHWEKQGYFKPNGDESQESFCIMIPPPNVTGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKI 94
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_NITSB (Valyl-tRNA synthetase OS=Nitratiruptor sp. (strain SB155-2) GN=valS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.214e-22 Identity = 48/84 (57.14%), Postives = 59/84 (70.24%), Query Frame = 2 Query: 2 WYSWWENSGYFIADNKS---SKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 +Y WE GYF D + +F I++PPPNVTG LHIGHALT +QD ++R++RM GY LW PG DHAGIATQ VVEK+L Sbjct: 16 FYQIWETRGYFETDGNKKIQNGKTFCIMMPPPNVTGRLHIGHALTFTLQDIMVRYKRMDGYETLWQPGTDHAGIATQNVVEKQL 99
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_BACLD (Valyl-tRNA synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=valS PE=3 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.214e-22 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y +W N +F A N K + +V+PPPNVTG LH+GHA + +QD + R +RM GY+ LW+PGMDHAGIATQ VE KL Sbjct: 22 YDYWVNGKFFEAKNDPEKEPYTVVIPPPNVTGKLHLGHAWDSTLQDIVTRMKRMQGYDVLWLPGMDHAGIATQAKVEAKL 101
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_TREDE (Valyl-tRNA synthetase OS=Treponema denticola GN=valS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 2 Query: 5 YSWWE-NSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 YS+WE N + K++K +F +V+PPPNVTG LH+GHAL +QD I+R+ RM G LW+PG DHAGIATQ VVEKKL Sbjct: 24 YSFWEANKCFSPIKKKNTKNTFTVVIPPPNVTGVLHVGHALDETLQDVIVRYHRMKGDETLWIPGTDHAGIATQSVVEKKL 104
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_RHOSK (Valyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=valS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKP-SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +G F A +S+P +F I++PPPNVTG+LH+GHA +QD + RW RM G++ LW PG DHAGIATQ+VVE++L Sbjct: 17 YDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVEREL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_RHOS4 (Valyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=valS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKP-SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +G F A +S+P +F I++PPPNVTG+LH+GHA +QD + RW RM G++ LW PG DHAGIATQ+VVE++L Sbjct: 17 YDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVEREL 97
BLAST of CF504388 vs. ExPASy Swiss-Prot
Match: SYV_RHOS1 (Valyl-tRNA synthetase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=valS PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.503e-22 Identity = 45/81 (55.56%), Postives = 60/81 (74.07%), Query Frame = 2 Query: 5 YSWWENSGYFIADNKSSKP-SFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKL 244 Y WE +G F A +S+P +F I++PPPNVTG+LH+GHA +QD + RW RM G++ LW PG DHAGIATQ+VVE++L Sbjct: 17 YDAWEKAGAFRAGANASRPETFCIMIPPPNVTGSLHMGHAFNNTLQDILTRWHRMRGFDTLWQPGQDHAGIATQMVVEREL 97 The following BLAST results are available for this feature:
BLAST of CF504388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 294
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504388 ID=CF504388; Name=CF504388; organism=Citrus sinensis; type=EST; length=245bpback to top |