CF504391

Overview
NameCF504391
Unique NameCF504391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9428 contig Csv1_Contig9428:68..541. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: U4976_SOYBN (UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.486e-14
Identity = 38/44 (86.36%), Postives = 41/44 (93.18%), Query Frame = 3
Query:   84 AMDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEER 215
            A  KDRENFVYIAKLAEQAERY+EMV++MK VANLDVELTVEER
Sbjct:    2 AASKDRENFVYIAKLAEQAERYEEMVESMKNVANLDVELTVEER 45          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.486e-14
Identity = 49/134 (36.57%), Postives = 73/134 (54.48%), Query Frame = 3
Query:   93 KDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVE----LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLI---PSCTGGESTVFYYKMKGDY 473
            K  E  +  A L++ AERYD+M   M+    L  E    L V  RNL SV YKN++ +RR+SWR+L S  QK E +   + V  I E  + VE EL +   +++ +I  +++    +    E  +F+ KMKGDY
Sbjct:    4 KQYEEALQKANLSDMAERYDDMAKEMRLAVTLAHEDKHILNVMARNLFSVAYKNLVSSRRSSWRMLCSERQKLEGKDPSV-VHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDY 136          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.712e-11
Identity = 47/115 (40.87%), Postives = 62/115 (53.91%), Query Frame = 3
Query:  165 AMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQK----------------EEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKM 461
            AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK                E A G +     + E  +K  +E  +IS + MQ    H I        +VFYY++
Sbjct:    3 AMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSFYLKMKGDYYRYLAEVATGEKR--ATVVESSEKAYSEAHEISKEHMQ--PTHPIRLGLALNYSVFYYEI 113          
The following BLAST results are available for this feature:
BLAST of CF504391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
U4976_SOYBN3.486e-1486.36UPF0497 membrane protein 6 OS=Glycine max PE=2 SV=... [more]
1433_ENCCU3.486e-1436.5714-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
1433G_SHEEP4.712e-1140.8714-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-880 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504391 ID=CF504391; Name=CF504391; organism=Citrus sinensis; type=EST; length=475bp
GCATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCA
CATTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCG
TGAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACG
ACGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTG
ACTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGG
TGCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAG
AGGCCAGAGGGAATGAACTTAATGTGAAAAGAATTAAAGAGTATAGGCAA
AAGGTGGAAGCTGAGCTGTCGAAGATCAGCACTGATATTATGCAAGTCAT
TGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTTTT
ACTATAAAATGAAAGGGGATTATTA
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