CF504391

Overview
NameCF504391
Unique NameCF504391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: RAD25_SCHPO (DNA damage checkpoint protein rad25 OS=Schizosaccharomyces pombe GN=rad25 PE=1 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 8.508e-45
Identity = 89/129 (68.99%), Postives = 106/129 (82.17%), Query Frame = 3
Query:   87 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            M   REN VY+AKLAEQAERY+EMV+ MKKVA  + +L+VEERNLLSV YKN+IGARRASWRI+SSIEQKEE+RGN      IKEYR+K+E ELS I  D++ V+++HLIP+ T GES VFYYKMKGDY
Sbjct:    1 MSNSRENSVYLAKLAEQAERYEEMVENMKKVACSNDKLSVEERNLLSVAYKNIIGARRASWRIISSIEQKEESRGNTRQAALIKEYRKKIEDELSDICHDVLSVLEKHLIPAATTGESKVFYYKMKGDY 129          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433_CANAL (14-3-3 protein homolog OS=Candida albicans GN=BMH1 PE=1 SV=2)

HSP 1 Score: 178.333 bits (451), Expect = 1.451e-44
Identity = 91/129 (70.54%), Postives = 105/129 (81.40%), Query Frame = 3
Query:   87 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            M   RE+ VY+AKLAEQAERY+EMV+ MK VA+   EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEEA+GNE  V  I++YR K+EAELSKI  DI+ V+ +HLI S   GES VFYYKMKGDY
Sbjct:    1 MPASREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEAKGNESQVALIRDYRAKIEAELSKICEDILSVLSDHLITSAQTGESKVFYYKMKGDY 129          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433_TRIHA (14-3-3 protein homolog OS=Trichoderma harzianum PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.233e-44
Identity = 88/124 (70.97%), Postives = 106/124 (85.48%), Query Frame = 3
Query:  102 ENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            E+ VY+AKLAEQAERY+EMV+ MK VA+ D +LTVEERNLLSV YKNVIGARRASWRI++SIEQKEE++GN   V  IKEYRQK+E EL+KI  DI++V+D+HLIPS   GES VFY+K+KGDY
Sbjct:    4 EDAVYLAKLAEQAERYEEMVENMKIVASEDRDLTVEERNLLSVAYKNVIGARRASWRIVTSIEQKEESKGNSSQVTLIKEYRQKIENELAKICDDILEVLDQHLIPSAKSGESKVFYHKIKGDY 127          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 14331_SOLTU (14-3-3-like protein OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 3.233e-44
Identity = 92/130 (70.77%), Postives = 107/130 (82.31%), Query Frame = 3
Query:   87 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            M   RE  VY+AKLAEQAERY+EMV+ M+KVA +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE +V  IKEYR K+EAELSKI   I+ +++ HL+PS +  ES VFY KMKGDY
Sbjct:    1 MADSREENVYMAKLAEQAERYEEMVEFMEKVAKVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSSIKEYRVKIEAELSKICDGILSLLESHLVPSASTAESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: RAD24_SCHPO (DNA damage checkpoint protein rad24 OS=Schizosaccharomyces pombe GN=rad24 PE=1 SV=2)

HSP 1 Score: 176.792 bits (447), Expect = 4.222e-44
Identity = 88/125 (70.40%), Postives = 103/125 (82.40%), Query Frame = 3
Query:   99 RENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            RE+ VY+AKLAEQAERY+ MV+ MK VA+ D ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE++GN   V+ IKEYRQK+E EL  I  DI+ V+++HLIP+    ES VFYYKMKGDY
Sbjct:    6 REDAVYLAKLAEQAERYEGMVENMKSVASTDQELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKGNTAQVELIKEYRQKIEQELDTICQDILTVLEKHLIPNAASAESKVFYYKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: BMH2_YEAST (Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 PE=1 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 2.096e-43
Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 3
Query:   87 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAR-GNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            M + RE+ VY+AKLAEQAERY+EMV+ MK VA+   EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++  +E  V+ I+ YR K+E EL+KIS DI+ V+D HLIPS T GES VFYYKMKGDY
Sbjct:    1 MSQTREDSVYLAKLAEQAERYEEMVENMKAVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELIRSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 14333_ORYSJ (14-3-3-like protein GF14-C OS=Oryza sativa subsp. japonica GN=GF14C PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 2.096e-43
Identity = 93/127 (73.23%), Postives = 106/127 (83.46%), Query Frame = 3
Query:   99 RENFVYIAKLAEQAERYDEMVDAMKKVAN-LDVE-LTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            RE  VY+AKLAEQAERY+EMV+ M+KVA  +DVE LTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE RGNE +V  IKEYR K+EAELSKI   I++++D HL+PS T  ES VFY KMKGDY
Sbjct:    3 REENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMKGDY 129          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 14336_ORYSJ (14-3-3-like protein GF14-F OS=Oryza sativa subsp. japonica GN=GF14F PE=1 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 4.668e-43
Identity = 91/130 (70.00%), Postives = 105/130 (80.77%), Query Frame = 3
Query:   90 DKDRENFVYIAKLAEQAERYDEMVDAMKKVANL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            +  RE  VY+AKLAEQAERY+EMV+ M+KVA   DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE  V  IKEYR ++E ELSKI   I++++D HL+PS T  ES VFY KMKGDY
Sbjct:    5 EASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDY 134          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433A_HORVU (14-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 7.963e-43
Identity = 91/127 (71.65%), Postives = 104/127 (81.89%), Query Frame = 3
Query:   99 RENFVYIAKLAEQAERYDEMVDAMKKVANL-DV-ELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            RE  VY+AKLAEQAERY+EMV+ M+KVA   DV ELTVEERNLLSV YKNVIGARRASWRI+SSIEQKEE+RGNE  V  IKEYR ++E ELSKI   I++++D HL+PS T  ES VFY KMKGDY
Sbjct:    8 REENVYMAKLAEQAERYEEMVEFMEKVAKTADVGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEAYVASIKEYRTRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMKGDY 134          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: BMH1_YEAST (Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 PE=1 SV=4)

HSP 1 Score: 172.17 bits (435), Expect = 1.040e-42
Identity = 90/130 (69.23%), Postives = 105/130 (80.77%), Query Frame = 3
Query:   87 MDKDRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEAR-GNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            M   RE+ VY+AKLAEQAERY+EMV+ MK VA+   EL+VEERNLLSV YKNVIGARRASWRI+SSIEQKEE++  +E  V+ I  YR K+E EL+KIS DI+ V+D HLIPS T GES VFYYKMKGDY
Sbjct:    1 MSTSREDSVYLAKLAEQAERYEEMVENMKTVASSGQELSVEERNLLSVAYKNVIGARRASWRIVSSIEQKEESKEKSEHQVELICSYRSKIETELTKISDDILSVLDSHLIPSATTGESKVFYYKMKGDY 130          
The following BLAST results are available for this feature:
BLAST of CF504391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
RAD25_SCHPO8.508e-4568.99DNA damage checkpoint protein rad25 OS=Schizosacch... [more]
1433_CANAL1.451e-4470.5414-3-3 protein homolog OS=Candida albicans GN=BMH1... [more]
1433_TRIHA3.233e-4470.9714-3-3 protein homolog OS=Trichoderma harzianum PE... [more]
14331_SOLTU3.233e-4470.7714-3-3-like protein OS=Solanum tuberosum PE=2 SV=1[more]
RAD24_SCHPO4.222e-4470.40DNA damage checkpoint protein rad24 OS=Schizosacch... [more]
BMH2_YEAST2.096e-4369.23Protein BMH2 OS=Saccharomyces cerevisiae GN=BMH2 P... [more]
14333_ORYSJ2.096e-4373.2314-3-3-like protein GF14-C OS=Oryza sativa subsp. ... [more]
14336_ORYSJ4.668e-4370.0014-3-3-like protein GF14-F OS=Oryza sativa subsp. ... [more]
1433A_HORVU7.963e-4371.6514-3-3-like protein A OS=Hordeum vulgare PE=2 SV=1[more]
BMH1_YEAST1.040e-4269.23Protein BMH1 OS=Saccharomyces cerevisiae GN=BMH1 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-880 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504391 ID=CF504391; Name=CF504391; organism=Citrus sinensis; type=EST; length=475bp
GCATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCA
CATTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCG
TGAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACG
ACGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTG
ACTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGG
TGCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAG
AGGCCAGAGGGAATGAACTTAATGTGAAAAGAATTAAAGAGTATAGGCAA
AAGGTGGAAGCTGAGCTGTCGAAGATCAGCACTGATATTATGCAAGTCAT
TGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTTTT
ACTATAAAATGAAAGGGGATTATTA
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