CF504391

Overview
NameCF504391
Unique NameCF504391
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length475
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9428 contig Csv1_Contig9428:68..541. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 143G1_ONCMY (14-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 7.981e-35
Identity = 73/128 (57.03%), Postives = 93/128 (72.66%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSC--TGGESTVFYYKMKGDY 473
            DRE  V  A+LAEQAERYD+M  AMK V  L+  L+ EERNLLSV YKNV+GARR+SWR++SSIEQK  A GNE  ++ ++ YR+K+E EL  +  D++ ++D  LI +C  T  ES VFY KMKGDY
Sbjct:    3 DREQLVQKARLAEQAERYDDMAAAMKSVTELNEALSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTSADGNEKKMEMVRAYREKIEKELETVCRDVLNLLDNFLIKNCNETQHESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 143B1_DANRE (14-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywhab1 PE=2 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 7.981e-35
Identity = 73/126 (57.94%), Postives = 96/126 (76.19%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            D+ + V  AKLAEQAERYD+M  +MK V    VEL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  GNE   +  +EYR+K+EAEL +I  D++ +++++LIP+ +  ES VFY KMKGDY
Sbjct:    2 DKSDLVQKAKLAEQAERYDDMAASMKAVTEGGVELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNEKKQQMAREYREKIEAELQEICNDVLGLLEKYLIPNASQAESKVFYLKMKGDY 125          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 143B2_ONCMY (14-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.778e-34
Identity = 74/126 (58.73%), Postives = 91/126 (72.22%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            D+ + V  AKLAEQAERYD+M  AMK V     EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  GNE      KEYR+K+E EL  I  D++ ++D++LI + T  ES VFY KMKGDY
Sbjct:    2 DKNDLVQKAKLAEQAERYDDMAGAMKSVTEQGGELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNEKKQAMAKEYREKIETELQDICNDVLGLLDKYLIANATAAESKVFYLKMKGDY 125          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433F_HUMAN (14-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 SV=4)

HSP 1 Score: 144.436 bits (363), Expect = 2.322e-34
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTG--GESTVFYYKMKGDY 473
            DRE  +  A+LAEQAERYD+M  AMK V  L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDY
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433B_XENTR (14-3-3 protein beta/alpha OS=Xenopus tropicalis GN=ywhab PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 2.322e-34
Identity = 72/126 (57.14%), Postives = 93/126 (73.81%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            D+   V  AKL+EQAERYD+M  +MK V  L  EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  GN+   +  +EYR+KVE EL  I  D++ ++D++L+P+ T  ES VFY KMKGDY
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLGLLDKYLVPNATPPESKVFYLKMKGDY 125          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 143B1_ONCMY (14-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34
Identity = 74/126 (58.73%), Postives = 92/126 (73.02%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            D+ + V  AKLAEQAERYD+M  AMK V     EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  GNE   +  +EYR+K+EAEL  I  D++ ++D +LI + T  ES VFY KMKGDY
Sbjct:    2 DKNDLVQKAKLAEQAERYDDMAAAMKAVTEQGGELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNEKKQQMAREYREKIEAELQDICKDVLALLDNYLIANATQAESKVFYLKMKGDY 125          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433F_RAT (14-3-3 protein eta OS=Rattus norvegicus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTG--GESTVFYYKMKGDY 473
            DRE  +  A+LAEQAERYD+M  AMK V  L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDY
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433F_MOUSE (14-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTG--GESTVFYYKMKGDY 473
            DRE  +  A+LAEQAERYD+M  AMK V  L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDY
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 1433F_BOVIN (14-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 3.033e-34
Identity = 71/128 (55.47%), Postives = 94/128 (73.44%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTG--GESTVFYYKMKGDY 473
            DRE  +  A+LAEQAERYD+M  AMK V  L+  L+ E+RNLLSV YKNV+GARR+SWR++SSIEQK  A GNE  ++++K YR+K+E EL  +  D++ ++D+ LI +C     ES VFY KMKGDY
Sbjct:    3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRVISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLALLDKFLIKNCNDFQYESKVFYLKMKGDY 130          
BLAST of CF504391 vs. ExPASy Swiss-Prot
Match: 143BB_XENLA (14-3-3 protein beta/alpha-B OS=Xenopus laevis GN=ywhab-B PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 3.961e-34
Identity = 72/126 (57.14%), Postives = 91/126 (72.22%), Query Frame = 3
Query:   96 DRENFVYIAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEEARGNELNVKRIKEYRQKVEAELSKISTDIMQVIDEHLIPSCTGGESTVFYYKMKGDY 473
            D+   V  AKL+EQAERYD+M  +MK V  L  EL+ EERNLLSV YKNV+GARR+SWR++SSIEQK E  GN+   +  +EYR+KVE EL  I  D++ ++D  L+P+ T  ES VFY KMKGDY
Sbjct:    2 DKSELVQKAKLSEQAERYDDMAASMKAVTELGAELSNEERNLLSVAYKNVVGARRSSWRVISSIEQKTE--GNDKRQQMAREYREKVETELQDICKDVLDLLDRFLVPNATPPESKVFYLKMKGDY 125          
The following BLAST results are available for this feature:
BLAST of CF504391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
143G1_ONCMY7.981e-3557.0314-3-3 protein gamma-1 OS=Oncorhynchus mykiss PE=2... [more]
143B1_DANRE7.981e-3557.9414-3-3 protein beta/alpha-1 OS=Danio rerio GN=ywha... [more]
143B2_ONCMY1.778e-3458.7314-3-3 protein beta/alpha-2 OS=Oncorhynchus mykiss... [more]
1433F_HUMAN2.322e-3455.4714-3-3 protein eta OS=Homo sapiens GN=YWHAH PE=1 S... [more]
1433B_XENTR2.322e-3457.1414-3-3 protein beta/alpha OS=Xenopus tropicalis GN... [more]
143B1_ONCMY3.033e-3458.7314-3-3 protein beta/alpha-1 OS=Oncorhynchus mykiss... [more]
1433F_RAT3.033e-3455.4714-3-3 protein eta OS=Rattus norvegicus GN=Ywhah P... [more]
1433F_MOUSE3.033e-3455.4714-3-3 protein eta OS=Mus musculus GN=Ywhah PE=1 S... [more]
1433F_BOVIN3.033e-3455.4714-3-3 protein eta OS=Bos taurus GN=YWHAH PE=1 SV=... [more]
143BB_XENLA3.961e-3457.1414-3-3 protein beta/alpha-B OS=Xenopus laevis GN=y... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-880 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504391 ID=CF504391; Name=CF504391; organism=Citrus sinensis; type=EST; length=475bp
GCATCTTCTCCTCTCCTTCTGAGTTCTCAGTTCTCAGTTCTCAGTTCTCA
CATTACAGTACTGCTTGTAAAAGCAAAAGATTCGCCATGGACAAAGATCG
TGAAAACTTCGTTTACATCGCCAAGCTTGCTGAACAAGCTGAACGATACG
ACGAAATGGTTGATGCAATGAAAAAGGTAGCGAATCTTGACGTGGAACTG
ACTGTGGAGGAGAGAAACTTACTCTCGGTTGGGTATAAGAATGTGATTGG
TGCACGTAGAGCATCATGGAGGATTCTTTCGTCGATAGAGCAGAAAGAAG
AGGCCAGAGGGAATGAACTTAATGTGAAAAGAATTAAAGAGTATAGGCAA
AAGGTGGAAGCTGAGCTGTCGAAGATCAGCACTGATATTATGCAAGTCAT
TGATGAGCATTTGATCCCTTCCTGCACCGGAGGTGAATCCACTGTGTTTT
ACTATAAAATGAAAGGGGATTATTA
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