CF504397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC_ASFM2 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 1.032e-22 Identity = 51/121 (42.15%), Postives = 75/121 (61.98%), Query Frame = 3 Query: 111 QEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIA-----HMYKTDRSKY 434 ++++ W + GPPD+ Y GG+F I FPP YP++PP++ F ++++HPNI S+G +C+ IL +EQ WSPA I VLLS+ SLL +PNPD P + A ++YK D Y Sbjct: 27 EDNLTEWDVILKGPPDTLYEGGLFKAKIVFPPKYPYEPPRLTFTSEMWHPNIYSDGKLCISILHGDNAEEQGMTWSPAQKIDTVLLSVISLLNEPNPDSPANVDAAKSYRKYLYKEDLESY 147
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC_ASFWA (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.761e-22 Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 3 Query: 111 QEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYK 416 + DM W + GPPD+ Y GG+F + FPP+YP+ PP++ F ++++HPNI +G +C+ IL +EQ WSPA I +LLS+ SLL +PNPD P + A Y+ Sbjct: 27 ENDMTEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPRLTFTSEMWHPNIYPDGKLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYR 136
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.003e-22 Identity = 47/113 (41.59%), Postives = 70/113 (61.95%), Query Frame = 3 Query: 117 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQ--WSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 D+ +W+ I G P + + GG++ +T+ FP +YP +PPK F +FHPN+ +G++CL IL E+ W PA+TI ++LL I LL DPN P E M+K D+ +YE R Sbjct: 37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVR 149
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.003e-22 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3 Query: 117 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNIN-SNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPL 389 ++F W A I GP ++PY GGVF + P YP +PP+V F TK+FHPN++ G ICLDILK WSPA T+ V +I +L+ P PD PL Sbjct: 33 NIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPL 124
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC11_SCHPO (Ubiquitin-conjugating enzyme E2-20 kDa OS=Schizosaccharomyces pombe GN=ubc11 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.003e-22 Identity = 43/107 (40.19%), Postives = 70/107 (65.42%), Query Frame = 3 Query: 117 DMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 ++ HW TI GP D+ Y G F +++ FP +YP+ PP + F + ++HPN++ +G+ICLDILK++WS + +LLS+ SLL +PN PL + A ++ D +Y+ Sbjct: 57 NLLHWAGTITGPSDTYYEGLKFKISMSFPANYPYSPPTIIFTSPMWHPNVDMSGNICLDILKDKWSAVYNVQTILLSLQSLLGEPNNASPLNAQAAELWSKDPIEYK 163
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.923e-22 Identity = 55/141 (39.01%), Postives = 83/141 (58.87%), Query Frame = 3 Query: 39 EADLEGAEGSPERSSYLLQQPAPLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 E L AE P + + Q ED+ +A I+G ++PY GVF + +H P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ +L I L+ +PNPDDPL+ +I+ +K ++ + AR Sbjct: 10 ELSLLAAEPPPGITCW---QDGDRMEDL---RAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPLMADISSEFKYNKPVFFKNAR 144
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 3.923e-22 Identity = 47/111 (42.34%), Postives = 75/111 (67.57%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 P +++F W AT+ GP D+ Y + +T+ FP DYP+KPP V F T +HPN++ +G+ICLDILKE W+ + + +LLS+ SLL +PN PL + A M+ +++++Y+ Sbjct: 54 PDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYK 163
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2T_HUMAN (Ubiquitin-conjugating enzyme E2 T OS=Homo sapiens GN=UBE2T PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.691e-22 Identity = 49/117 (41.88%), Postives = 76/117 (64.96%), Query Frame = 3 Query: 111 QEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL----KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 ++ M +A I+G ++PY GVF + + P YPF+PP++ F T ++HPNI+S G ICLD+L K W P+L I+ VL SI L+++PNPDDPL+ +I+ +K ++ + AR Sbjct: 28 KDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNAR 144
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC_ASFB7 (Ubiquitin-conjugating enzyme E2 OS=African swine fever virus (strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 6.691e-22 Identity = 49/121 (40.50%), Postives = 73/121 (60.33%), Query Frame = 3 Query: 111 QEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDIL-----KEQ---WSPALTISKVLLSICSLLTDPNPDDPLVPEIA-----HMYKTDRSKY 434 + ++ W + GPPD+ Y GG+F + FPP+YP+ PPK+ F ++++HPNI +G +C+ IL +EQ WSPA I +LLS+ SLL +PNPD P + A ++YK D Y Sbjct: 27 ENNITEWDVILRGPPDTLYEGGLFKAKVAFPPEYPYAPPKLTFTSEMWHPNIYPDGRLCISILHGDNAEEQGMTWSPAQKIDTILLSVISLLNEPNPDSPANVDAAKSYRKYVYKEDLESY 147
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 8.739e-22 Identity = 49/115 (42.61%), Postives = 70/115 (60.87%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P +ED+ Q +I GP +PYAGG+F + + D+P PPK F TK+FHPN++SNG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR Sbjct: 35 PNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYFLTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAR 149 The following BLAST results are available for this feature:
BLAST of CF504397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 262
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504397 ID=CF504397; Name=CF504397; organism=Citrus sinensis; type=EST; length=449bpback to top |