CF504397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2B_RABIT (Ubiquitin-conjugating enzyme E2 B OS=Oryctolagus cuniculus GN=UBE2B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.753e-28 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 AP + ++ W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 27 APSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-28 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K LQ+DPP S P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.753e-28 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 AP + ++ W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 27 APSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-28 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K LQ+DPP S P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.753e-28 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 AP + ++ W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 27 APSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-28 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K LQ+DPP S P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.753e-28 Identity = 50/112 (44.64%), Postives = 74/112 (66.07%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 AP + ++ W A I GP +P+ G F + I F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 27 APSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 27.7202 bits (60), Expect = 2.753e-28 Identity = 10/24 (41.67%), Postives = 16/24 (66.67%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K LQ+DPP S P Sbjct: 5 ARRRLMRDFKRLQEDPPVGVSGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_PONAB (Ubiquitin-conjugating enzyme E2 N OS=Pongo abelii GN=UBE2N PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P + + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ ++ TAR Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_MOUSE (Ubiquitin-conjugating enzyme E2 N OS=Mus musculus GN=Ube2n PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P + + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ ++ TAR Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_HUMAN (Ubiquitin-conjugating enzyme E2 N OS=Homo sapiens GN=UBE2N PE=1 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P + + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ ++ TAR Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_BOVIN (Ubiquitin-conjugating enzyme E2 N OS=Bos taurus GN=UBE2N PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.248e-28 Identity = 56/115 (48.70%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P + + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ ++ TAR Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC1_CAEEL (Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans GN=ubc-1 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.024e-27 Identity = 49/112 (43.75%), Postives = 77/112 (68.75%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYE 437 AP ++++ W+A I GP ++P+ G F +++ F +YP KPP V F +K+FHPN+ ++GSICLDIL+ +WSP ++ +L SI SLL +PNP+ P A +Y+ +R +YE Sbjct: 27 APTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLAAQLYQENRREYE 138 HSP 2 Score: 26.9498 bits (58), Expect = 1.024e-27 Identity = 9/22 (40.91%), Postives = 15/22 (68.18%), Query Frame = 1 Query: 40 KRILKELKDLQKDPPTSCSSRP 105 +R++++ K LQ+DPP S P Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_DROME (Ubiquitin-conjugating enzyme E2 N OS=Drosophila melanogaster GN=ben PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 1.392e-27 Identity = 57/127 (44.88%), Postives = 83/127 (65.35%), Query Frame = 3 Query: 87 LLQQPAPL------QEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 L+Q+P P + + ++ + GP DSP+ GGVF + + P DYP PKV F TK++HPNI+ G ICLD+LK++WSPAL I +LLSI +LL+ PNPDDPL ++A ++K + ++ AR Sbjct: 15 LMQEPVPGINAIPDENNARYFHVIVTGPNDSPFEGGVFKLELFLPEDYPMSAPKVRFITKIYHPNIDRLGRICLDVLKDKWSPALQIRTILLSIQALLSAPNPDDPLANDVAELWKVNEAEAIRNAR 141 The following BLAST results are available for this feature:
BLAST of CF504397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 262
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504397 ID=CF504397; Name=CF504397; organism=Citrus sinensis; type=EST; length=449bpback to top |