CF504397
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.738e-27 Identity = 50/116 (43.10%), Postives = 74/116 (63.79%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 +PL +++ W A I+GP D+P+ G F + + F YP KPP+V F +++FHPN+ ++G +CLDIL+ +WSP +S +L S+ SLL DPN P E A++YK RS Y R Sbjct: 27 SPLPDNVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVR 142 HSP 2 Score: 27.7202 bits (60), Expect = 1.738e-27 Identity = 9/24 (37.50%), Postives = 18/24 (75.00%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K +Q+DPP+ S+ P Sbjct: 5 ARRRLMRDFKRMQQDPPSGVSASP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_RAT (Ubiquitin-conjugating enzyme E2 N OS=Rattus norvegicus GN=Ube2n PE=1 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 1.818e-27 Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P + + ++ I GP DSP+ GG F + + P +YP PKV F TK++HPN++ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +K++ ++ TAR Sbjct: 27 PDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKSNEAQAIETAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBE2N_DICDI (Probable ubiquitin-conjugating enzyme E2 N OS=Dictyostelium discoideum GN=ube2n PE=3 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.818e-27 Identity = 60/127 (47.24%), Postives = 82/127 (64.57%), Query Frame = 3 Query: 87 LLQQPAP------LQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 L+ +PAP ++ +++ I GP DSP+ GGVF + + DYP PKV F TK++HPNI+ G ICLDILK++WSPAL I VLLSI +LL+ PNPDDPL ++A +KT+ + AR Sbjct: 15 LMTEPAPGISATPATDNFRYFKVAISGPLDSPFEGGVFNLELFLTDDYPMSAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEHWKTNEKEAMARAR 141
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 116.701 bits (291), Expect = 1.427e-26 Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 108 LQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 + +D+ H + GP +PY GG F+V I P DYPF+PPK+ F TK++HPN++S G+ICLDILK+QWSP T+ L+S+ SLL P P +P ++A +Y + ++ TAR Sbjct: 29 INDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQFVRTAR 143 HSP 2 Score: 22.3274 bits (46), Expect = 1.427e-26 Identity = 9/14 (64.29%), Postives = 12/14 (85.71%), Query Frame = 1 Query: 37 SKRILKELKDLQKD 78 S+RI KEL D+Q+D Sbjct: 6 SRRIAKELADVQQD 19
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 1.433e-26 Identity = 49/111 (44.14%), Postives = 71/111 (63.96%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY 434 AP +++ W A I GP D+P+ G F + + F YP KPP V F +K+FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPNP+ P E A +Y+ + +Y Sbjct: 27 APCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKFLSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEY 137 HSP 2 Score: 24.6386 bits (52), Expect = 1.433e-26 Identity = 9/24 (37.50%), Postives = 14/24 (58.33%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 + KR++++ K L DPP S P Sbjct: 5 SKKRLIRDFKRLSTDPPGGISGAP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC2_YARLI (Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica GN=UBC2 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 1.874e-26 Identity = 47/116 (40.52%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 +P+ +++ W A I+GP ++P+ G F + + F YP KPP V F +++FHPN+ S+G +CLDIL+ +WSP ++ +L S+ SLL DPN P E + +YK R +YE R Sbjct: 27 SPVADNVLTWNAVIIGPAETPFEDGTFRMVLQFDEQYPNKPPAVKFVSQMFHPNVYSSGELCLDILQNRWSPTYDVAAILTSVQSLLNDPNTSSPANVEASMLYKDHRQQYEKRVR 142 HSP 2 Score: 26.9498 bits (58), Expect = 1.874e-26 Identity = 9/24 (37.50%), Postives = 17/24 (70.83%), Query Frame = 1 Query: 34 ASKRILKELKDLQKDPPTSCSSRP 105 A +R++++ K +Q+DPP S+ P Sbjct: 5 ARRRLMRDFKRMQQDPPQGVSASP 28
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC13_YEAST (Ubiquitin-conjugating enzyme E2 13 OS=Saccharomyces cerevisiae GN=UBC13 PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 2.440e-26 Identity = 54/115 (46.96%), Postives = 75/115 (65.22%), Query Frame = 3 Query: 105 PLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 P +++ ++Q TI GP SPY G+F + ++ P DYP + PKV F TK++HPNI+ G ICLD+LK WSPAL I VLLSI +LL PNP+DPL ++A + + + AR Sbjct: 27 PHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAR 141 HSP 2 Score: 21.9422 bits (45), Expect = 2.440e-26 Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 1 Query: 40 KRILKELKDLQKDPPTSCSSRP 105 KRI+KE + L DP ++ P Sbjct: 6 KRIIKETEKLVSDPVPGITAEP 27
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 5.848e-26 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY 434 +PL +++ W A I+GP D+PY G F + + F DYP KPP V F +++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +S+Y Sbjct: 27 SPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQY 137
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 7.638e-26 Identity = 59/139 (42.45%), Postives = 86/139 (61.87%), Query Frame = 3 Query: 36 VEADLEGAEGSPERSSYLLQQPAPLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYETTAR 449 ++ +L+ E + + S + P +++ TI GP +PY GG F + I P YPF+PPK+ F TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP +A Y + + +TAR Sbjct: 7 IQKELQDCERNQDSSGIRV---CPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTAR 142
BLAST of CF504397 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 9.975e-26 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 3 Query: 102 APLQEDMFHWQATIMGPPDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKY 434 +PL +++ W A I+GP D+P+ G F + + F YP KPP V F +++FHPN+ ++G +CLDIL+ +WSP +S +L SI SLL DPN P E A++YK RS+Y Sbjct: 27 SPLPDNVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDILQNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQY 137 The following BLAST results are available for this feature:
BLAST of CF504397 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 262
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504397 ID=CF504397; Name=CF504397; organism=Citrus sinensis; type=EST; length=449bpback to top |