CF504403

Overview
NameCF504403
Unique NameCF504403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MK08A_CYPCA (Mitogen-activated protein kinase 8A OS=Cyprinus carpio GN=mapk8a PE=2 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 2.208e-11
Identity = 24/60 (40.00%), Postives = 37/60 (61.67%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDV-VPPPLRREFTDVYIAAELMDTDLYQIIR 430
            F N   AKR  RE+ L+++ +H+N+I + +V        EF DVY+  ELMD +L Q+I+
Sbjct:   61 FQNQTHAKRAYRELVLMKYVNHKNIICLLNVFTSQKTLDEFQDVYLVMELMDANLCQVIQ 120          

HSP 2 Score: 35.8094 bits (81), Expect = 2.208e-11
Identity = 18/54 (33.33%), Postives = 30/54 (55.56%), Query Frame = 1
Query:   94 QFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            +F   ++  + F +  +Y+  + PIG GA GIVCS  +      VA+KK++  F
Sbjct:    9 EFYSVDVGDSTFTVLKRYQN-LRPIGSGAQGIVCSAYDHNLERNVAIKKLSRPF 61          

HSP 3 Score: 23.483 bits (49), Expect = 2.208e-11
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  430 LKSSLSEEHCQYFLYQLLRGLK 495
            ++  L  E   Y LYQ+L G+K
Sbjct:  119 IQMELDHERLSYLLYQMLCGIK 140          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 50.0618 bits (118), Expect = 2.220e-11
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDV-VPPPLRREFTDVYIAAELMDTDLYQIIR 430
            F N   AKR  RE+ L++  +H+N+I + +V  P     EF DVYI  ELMD +L Q+I+
Sbjct:   61 FQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ 120          

HSP 2 Score: 33.4982 bits (75), Expect = 2.220e-11
Identity = 18/53 (33.96%), Postives = 28/53 (52.83%), Query Frame = 1
Query:   97 FIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            F    I  + F +  +Y+  + PIG GA GIVC+  +      VA+KK++  F
Sbjct:   10 FYSVEIGDSTFTVLKRYQN-LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61          

HSP 3 Score: 23.483 bits (49), Expect = 2.220e-11
Identity = 9/22 (40.91%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  430 LKSSLSEEHCQYFLYQLLRGLK 495
            ++  L  E   Y LYQ+L G+K
Sbjct:  119 IQMELDHERMSYLLYQMLCGIK 140          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MPK16_ARATH (Mitogen-activated protein kinase 16 OS=Arabidopsis thaliana GN=MPK16 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSN 436
            F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N
Sbjct:   60 FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFRDIYVVFELMESDLHQVIKAN 120          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MPK15_ORYSJ (Mitogen-activated protein kinase 15 OS=Oryza sativa subsp. japonica GN=MPK15 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSN 436
            F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N
Sbjct:   48 FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN 108          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MPK14_ORYSJ (Mitogen-activated protein kinase 14 OS=Oryza sativa subsp. japonica GN=MPK14 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.359e-11
Identity = 29/61 (47.54%), Postives = 46/61 (75.41%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSN 436
            F++  DA R LREIKLL+   H +++ +K ++ PP RREF D+Y+  ELM++DL+Q+I++N
Sbjct:   48 FEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKAN 108          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: KSS1_YEAST (Mitogen-activated protein kinase KSS1 OS=Saccharomyces cerevisiae GN=KSS1 PE=1 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.681e-11
Identity = 32/78 (41.03%), Postives = 48/78 (61.54%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHF-DHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQVYPRSTASISCINFF 484
            F   +   RT+REIKLL++F +HEN+I++ D V P    +   VY+  ELM+TDL ++I +NQ    ST S   + +F
Sbjct:   47 FSKKLFVTRTIREIKLLRYFHEHENIISILDKVRPVSIDKLNAVYLVEELMETDLQKVI-NNQNSGFSTLSDDHVQYF 123          

HSP 2 Score: 32.7278 bits (73), Expect = 2.681e-11
Identity = 17/39 (43.59%), Postives = 26/39 (66.67%), Query Frame = 1
Query:  127 FEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKI 243
            F+I ++Y+   + IG GAYG VCS ++  +   VA+KKI
Sbjct:    7 FDIPSQYKLVDL-IGEGAYGTVCSAIHKPSGIKVAIKKI 44          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MK15_HUMAN (Mitogen-activated protein kinase 15 OS=Homo sapiens GN=MAPK15 PE=1 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 3.443e-11
Identity = 30/61 (49.18%), Postives = 39/61 (63.93%), Query Frame = 2
Query:  251 AFDNHMDAKRTLREIKLLQHF-DHENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIR 430
            AF +  DA+RT REI LLQ F DH N+I++ DV+     R   D+Y+  E MDTDL  +IR
Sbjct:   47 AFRDKTDAQRTFREITLLQEFGDHPNIISLLDVIRAENDR---DIYLVFEFMDTDLNAVIR 104          

HSP 2 Score: 34.2686 bits (77), Expect = 3.443e-11
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  166 IGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            +G+GAYGIV   ++  T E+VA+KKI + F
Sbjct:   19 LGQGAYGIVWKAVDRRTGEVVAIKKIFDAF 48          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: JNK1_CAEEL (Stress-activated protein kinase jnk-1 OS=Caenorhabditis elegans GN=jnk-1 PE=1 SV=2)

HSP 1 Score: 50.0618 bits (118), Expect = 4.488e-11
Identity = 26/67 (38.81%), Postives = 40/67 (59.70%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDVVPPPLR-REFTDVYIAAELMDTDLYQIIRSNQVYPR 451
            F N   AKR  RE+KL+   +H+N+I + +   P  +  EF D+YI  ELMD +L Q+I+ +  + R
Sbjct:  154 FQNVTHAKRAYRELKLMSLVNHKNIIGILNCFTPQKKLDEFNDLYIVMELMDANLCQVIQMDLDHER 220          

HSP 2 Score: 36.5798 bits (83), Expect = 4.488e-11
Identity = 17/30 (56.67%), Postives = 21/30 (70.00%), Query Frame = 1
Query:  166 IGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            IG GA GIVCS  +T  NE VA+KK++  F
Sbjct:  125 IGSGAQGIVCSAFDTVRNEQVAIKKLSRPF 154          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MK15_MOUSE (Mitogen-activated protein kinase 15 OS=Mus musculus GN=Mapk15 PE=1 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 7.525e-11
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 2
Query:  251 AFDNHMDAKRTLREIKLLQHFD-HENVIAVKDVVPPPLRREFTDVYIAAELMDTDLYQIIRSNQV 442
            AF + +DA+RT REI LL+ F  H N+I + DV+P    R   D+Y+  E MDTDL  +I+  ++
Sbjct:   48 AFRDQIDAQRTFREIMLLKEFGGHPNIIRLLDVIPAKNDR---DIYLVFESMDTDLNAVIQKGRL 109          

HSP 2 Score: 35.039 bits (79), Expect = 7.525e-11
Identity = 15/30 (50.00%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  166 IGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            +G+GAYGIV   ++  T E+VA+KKI + F
Sbjct:   20 LGKGAYGIVWKAMDRRTGEVVAIKKIFDAF 49          
BLAST of CF504403 vs. ExPASy Swiss-Prot
Match: MK10_RAT (Mitogen-activated protein kinase 10 OS=Rattus norvegicus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 50.0618 bits (118), Expect = 7.561e-11
Identity = 25/60 (41.67%), Postives = 38/60 (63.33%), Query Frame = 2
Query:  254 FDNHMDAKRTLREIKLLQHFDHENVIAVKDV-VPPPLRREFTDVYIAAELMDTDLYQIIR 430
            F N   AKR  RE+ L++  +H+N+I++ +V  P     EF DVY+  ELMD +L Q+I+
Sbjct:   99 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ 158          

HSP 2 Score: 35.8094 bits (81), Expect = 7.561e-11
Identity = 18/54 (33.33%), Postives = 30/54 (55.56%), Query Frame = 1
Query:   94 QFIQYNIFGNLFEITAKYRPPIMPIGRGAYGIVCSVLNTETNELVAMKKIANRF 255
            QF    +  + F +  +Y+  + PIG GA GIVC+  +   +  VA+KK++  F
Sbjct:   47 QFYSVEVGDSTFTVLKRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF 99          
The following BLAST results are available for this feature:
BLAST of CF504403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
MK08A_CYPCA2.208e-1140.00Mitogen-activated protein kinase 8A OS=Cyprinus ca... [more]
MK08_MOUSE2.220e-1143.33Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MPK16_ARATH2.359e-1147.54Mitogen-activated protein kinase 16 OS=Arabidopsis... [more]
MPK15_ORYSJ2.359e-1147.54Mitogen-activated protein kinase 15 OS=Oryza sativ... [more]
MPK14_ORYSJ2.359e-1147.54Mitogen-activated protein kinase 14 OS=Oryza sativ... [more]
KSS1_YEAST2.681e-1141.03Mitogen-activated protein kinase KSS1 OS=Saccharom... [more]
MK15_HUMAN3.443e-1149.18Mitogen-activated protein kinase 15 OS=Homo sapien... [more]
JNK1_CAEEL4.488e-1138.81Stress-activated protein kinase jnk-1 OS=Caenorhab... [more]
MK15_MOUSE7.525e-1143.08Mitogen-activated protein kinase 15 OS=Mus musculu... [more]
MK10_RAT7.561e-1141.67Mitogen-activated protein kinase 10 OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-892 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-17_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504403 ID=CF504403; Name=CF504403; organism=Citrus sinensis; type=EST; length=495bp
GAGAAAAAGAGAGAGAGTAAAATGGCTGACGTGGCGCAGGTCAACGGCGT
AGGTCAAACGGCTGATTTTCCTGCGGTACCGACGCACGGCGGTCAGTTTA
TACAGTACAATATATTTGGAAACTTGTTTGAAATCACGGCCAAGTATCGG
CCTCCGATCATGCCGATTGGTCGCGGCGCGTACGGGATCGTTTGCTCGGT
GTTGAATACGGAGACGAATGAGCTCGTTGCGATGAAGAAAATAGCGAATC
GCTTTTGATAATCACATGGATGCCAAGCGAACGCTTCGTGAGATTAAGCT
TCTGCAACATTTCGATCATGAAAATGTGATAGCTGTAAAAGATGTGGTTC
CCCCACCGTTACGAAGAGAATTCACTGATGTCTATATTGCTGCGGAACTC
ATGGACACTGACCTTTACCAAATTATTCGCTCAAATCAAGTTTATCCGAG
GAGCACTGCCAGTATTTCTTGTATCAACTTCTTCGAGGACTCAAG
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