CF504416

Overview
NameCF504416
Unique NameCF504416
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length265
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.296e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3
Query:   51 FYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKGLGTPTREEIRCMN--PNYTDF 263
            +YR P+++FGA  Y+TSID+WSAGC+ AEL   G+PLFPG +  DQL  I + LGTPT E+   M   P+Y  +
Sbjct:  166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPY 239          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CDK5_MOUSE (Cell division protein kinase 5 OS=Mus musculus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.296e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3
Query:   51 FYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKGLGTPTREEIRCMN--PNYTDF 263
            +YR P+++FGA  Y+TSID+WSAGC+ AEL   G+PLFPG +  DQL  I + LGTPT E+   M   P+Y  +
Sbjct:  166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPY 239          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CDK5_BOVIN (Cell division protein kinase 5 OS=Bos taurus GN=CDK5 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 4.296e-14
Identity = 38/74 (51.35%), Postives = 51/74 (68.92%), Query Frame = 3
Query:   51 FYRAPELIFGATEYTTSIDIWSAGCVLAELL-LGQPLFPGENAVDQLVEIIKGLGTPTREEIRCMN--PNYTDF 263
            +YR P+++FGA  Y+TSID+WSAGC+ AEL   G+PLFPG +  DQL  I + LGTPT E+   M   P+Y  +
Sbjct:  166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPAMTKLPDYKPY 239          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CDK11_RAT (Cell division protein kinase 11 OS=Rattus norvegicus GN=Cdk11 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.296e-14
Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 3
Query:   51 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTRE 227
            +YRAPEL+ GA EY+T+ D+WS GC+  ELL  +PLFPG++ +DQ+ +I K +GTP+ +
Sbjct:  243 WYRAPELLLGAKEYSTACDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDIGTPSEK 301          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 32/56 (57.14%), Postives = 44/56 (78.57%), Query Frame = 3
Query:   51 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTP 218
            +YRAP+++ G+  YTTSIDIWSAGC+ AE+  G+PLFPG    DQL++I + +GTP
Sbjct:  171 WYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKIFRLMGTP 226          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: MKC1_CANAL (Mitogen-activated protein kinase MKC1 OS=Candida albicans GN=MKC1 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 35/63 (55.56%), Postives = 47/63 (74.60%), Query Frame = 3
Query:   48 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTREEIR 236
            R+YRAPE++   T YT +IDIWS GC+LAELL G+PLF G++ VDQL +I+  LGTP    ++
Sbjct:  217 RWYRAPEIMLSFTNYTKAIDIWSVGCILAELLGGKPLFRGKDYVDQLNQILMILGTPPESTLQ 279          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: MAPK_FUSSO (Mitogen-activated protein kinase OS=Fusarium solani subsp. pisi GN=MAPK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 34/61 (55.74%), Postives = 46/61 (75.41%), Query Frame = 3
Query:   48 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTREE 230
            R+YRAPE++    EYT +ID+WS GC+LAE+L G+PLFPG++   QL  I+  LGTPT E+
Sbjct:  189 RWYRAPEIMLTFKEYTKAIDVWSVGCILAEMLSGKPLFPGKDYHHQLTLILDVLGTPTMED 249          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: ERK1_CANAL (Extracellular signal-regulated kinase 1 OS=Candida albicans GN=ERK1 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 3
Query:   48 RFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTREE 230
            R+YRAPE++    EYTT+ID+WS GC+LAE+L G+PLFPG +  +QL  I++ LGTP  E+
Sbjct:  234 RWYRAPEIMLTFQEYTTAIDVWSVGCILAEMLSGRPLFPGRDYHNQLWLIMEVLGTPNMED 294          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CKB11_ARATH (Cyclin-dependent kinase B1-1 OS=Arabidopsis thaliana GN=CDKB1-1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 32/70 (45.71%), Postives = 48/70 (68.57%), Query Frame = 3
Query:   21 KQTYHTYVHRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTREE 230
            K   H  V  +YRAPE++ G+T Y+T +D+WS GC+ AE++  Q LFPG++   QL+ I + LGTPT ++
Sbjct:  173 KSYTHEIVTLWYRAPEVLLGSTHYSTGVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPTEQQ 242          
BLAST of CF504416 vs. ExPASy Swiss-Prot
Match: CDK7_CARAU (Cell division protein kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.611e-14
Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 3
Query:   33 HTYVHRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKGLGTPTREEIRCMN--PNYTDF 263
            H  V R+YRAPEL+FGA  Y   +D+W+ G +LAELLL  P   G++ +DQL  I + LGTPT E    M+  P+Y  F
Sbjct:  170 HQVVTRWYRAPELLFGARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPTEETWPGMSNLPDYVSF 248          
The following BLAST results are available for this feature:
BLAST of CF504416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 404
Match NameE-valueIdentityDescription
CDK5_RAT4.296e-1451.35Cell division protein kinase 5 OS=Rattus norvegicu... [more]
CDK5_MOUSE4.296e-1451.35Cell division protein kinase 5 OS=Mus musculus GN=... [more]
CDK5_BOVIN4.296e-1451.35Cell division protein kinase 5 OS=Bos taurus GN=CD... [more]
CDK11_RAT4.296e-1452.54Cell division protein kinase 11 OS=Rattus norvegic... [more]
PHO85_CANAL5.611e-1457.14Negative regulator of the PHO system OS=Candida al... [more]
MKC1_CANAL5.611e-1455.56Mitogen-activated protein kinase MKC1 OS=Candida a... [more]
MAPK_FUSSO5.611e-1455.74Mitogen-activated protein kinase OS=Fusarium solan... [more]
ERK1_CANAL5.611e-1455.74Extracellular signal-regulated kinase 1 OS=Candida... [more]
CKB11_ARATH5.611e-1445.71Cyclin-dependent kinase B1-1 OS=Arabidopsis thalia... [more]
CDK7_CARAU5.611e-1448.10Cell division protein kinase 7 OS=Carassius auratu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-905 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_B01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504416 ID=CF504416; Name=CF504416; organism=Citrus sinensis; type=EST; length=265bp
AAAACAGCTGATTGCTGGAGAAGCAAACATATCATACATATGTTCACCGT
TTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAATATACAACCTC
CATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCTTCTTTTGGGCC
AGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTGTAGAGATTATC
AAGGGTCTCGGTACACCCACTCGTGAAGAAATTCGCTGTATGAATCCAAA
TTATACCGATTTTAG
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