CF504447

Overview
NameCF504447
Unique NameCF504447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 6.788e-44
Identity = 76/123 (61.79%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN AM +H++++M  ILE+Y GF  +K +VDVGG  G  L  I +KYP IKGINFD PHVIE AP +P +EHV GDMF ++P GDA+F+KWI HDW DEHC KLLKNCY ++P +G
Sbjct:  151 DPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNG 273          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.865e-44
Identity = 78/123 (63.41%), Postives = 96/123 (78.05%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D RFNK FN+ M+NH+++ M  I+E Y GF+ +K LVDVGG  G +L  ITSK+  +KGINFD PHVI  A  +  IEHV GDMF+SVPKGDAIF+KWILHDW D HCL++LKNCYKS+PE+G
Sbjct:  160 DQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTYQGIEHVGGDMFESVPKGDAIFMKWILHDWSDAHCLQVLKNCYKSLPENG 282          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 8.865e-44
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+YKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVIE AP +P +EHV GDMF SVP  DA+F+KWI HDW D HCLK LKNCY ++PE+G
Sbjct:  169 DPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSVPNADAVFMKWICHDWSDAHCLKFLKNCYDALPENG 291          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.158e-43
Identity = 78/123 (63.41%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+ + M  ILESYKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVI  AP  P +E+V GDMF SVPK DA+F+KWI HDW DEHCL+LLKNCY ++PE+G
Sbjct:  168 DPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLRLLKNCYDALPENG 290          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.512e-43
Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  + ++Y+GF  +  LVDVGG  G TL  I SKYP I+ INFD PHVIE AP +P IEHV GDMF SVPKGDAIF+KWI HDW DEHCLKLLKNCY ++P +G
Sbjct:  145 DPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNG 267          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 1.512e-43
Identity = 78/123 (63.41%), Postives = 93/123 (75.61%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  + ++Y+GF  +  LVDVGG  G TL  I SKYP I+ INFD PHVIE AP +P IEHV GDMF SVPKGDAIF+KWI HDW DEHCLKLLKNCY ++P +G
Sbjct:  145 DPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYPGIEHVGGDMFVSVPKGDAIFMKWICHDWSDEHCLKLLKNCYDALPNNG 267          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 3.369e-43
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +HT+L M  ILE Y GF  +  +VDVGG  G T+  I SKYP IKGINFD PHVI  AP +P +E V GDMF SVPK DAIF+KWI HDW D+HC+KLLKNCY+++P +G
Sbjct:  165 DPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIRDAPSYPGVEQVGGDMFVSVPKADAIFMKWICHDWSDDHCIKLLKNCYEALPANG 287          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 3.369e-43
Identity = 77/123 (62.60%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE YKGF  +  +VDVGG  G T+  I SKYP IKGINFD  HVIE AP +P +EHV  DMF SVPK DAIF+KWI HDW DEHCLK LKNCY+++P +G
Sbjct:  165 DPRFNKVFNRGMSDHSTMTMKKILEDYKGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLSHVIEDAPAYPGVEHVGRDMFVSVPKADAIFMKWICHDWSDEHCLKFLKNCYEALPANG 287          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 2.184e-42
Identity = 76/123 (61.79%), Postives = 90/123 (73.17%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFN+ FN  M NH+ +I   +LE Y GF  +  LVDVGG +G TL AITS +P IKGINFD PHVI  AP  P ++HV GDMF+SVP GDAI +KWILHDW D HC  LLKNCY ++PE+G
Sbjct:  168 DPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENG 290          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42
Identity = 76/123 (61.79%), Postives = 88/123 (71.54%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M  H+ + M  ILE+YKGF  +  LVDVGG  G  +  I SKYP IKGINFD PHVI  AP  P +E+V GDMF SVPK DA+F+KWI HDW DEHCL  LKNCY ++PE+G
Sbjct:  168 DPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFPGVENVGGDMFVSVPKADAVFMKWICHDWSDEHCLTFLKNCYDALPENG 290          
The following BLAST results are available for this feature:
BLAST of CF504447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_EUCGL6.788e-4461.79Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_ZINEL8.865e-4463.41Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_POPKI8.865e-4462.60Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT3_POPKI1.158e-4363.41Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
OMT2_CHRAE1.512e-4363.41Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE1.512e-4363.41Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_CAPCH3.369e-4362.60Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
COMT1_CAPAN3.369e-4362.60Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_SACOF2.184e-4261.79Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT2_POPTM4.865e-4261.79Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-936 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504447 ID=CF504447; Name=CF504447; organism=Citrus sinensis; type=EST; length=379bp
GGACGAGTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAA
CCATACCTCTCTGATTATGAGCAACATTCTTGAATCTTACAAGGGCTTCG
CCAACATCAAGCAACTGGTCGATGTTGGTGGCAATCTCGGCGTTACTCTT
CAAGCCATCACTTCCAAGTACCCCTATATTAAGGGCATCAATTTCGACCA
GCCTCATGTTATTGAGCATGCCCCACTACATCCACATATTGAGCATGTAG
CGGGTGATATGTTTCAAAGTGTTCCAAAAGGCGACGCCATTTTTCTGAAG
TGGATACTGCACGATTGGGACGATGAACATTGCTTGAAGTTGTTGAAGAA
TTGCTACAAAAGCGTTCCAGAAGATGGAA
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