CF504447

Overview
NameCF504447
Unique NameCF504447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 4.865e-42
Identity = 75/123 (60.98%), Postives = 91/123 (73.98%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            DPRFNK FN  M +H+++ M  ILE+YKGF  ++ +VDVGG  G  L  I +KYP +KGINFD PHVIE AP  P ++HV GDMF SVPKGDAIF+KWI HDW D+HC K LKNCY ++P  G
Sbjct:  170 DPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDLPHVIEDAPPLPGVKHVGGDMFVSVPKGDAIFMKWICHDWSDDHCAKFLKNCYDALPNIG 292          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 1.565e-40
Identity = 72/123 (58.54%), Postives = 88/123 (71.54%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D RFN+ FN  M NH+ +I   +L+ Y GF  +  LVDVGG +G TL AITS++P+I G+NFD PHVI  AP  P + HV GDMF SVP GDAI +KWILHDW D HC  LLKNCY ++PE+G
Sbjct:  170 DARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENG 292          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 4.553e-40
Identity = 68/123 (55.28%), Postives = 94/123 (76.42%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D RFN  FN  M +HT L+M  +L++Y GF ++K LVDVGGN+GV +  I +K+ +IKGIN+D PHVI  AP +P +EHV G+MF+S+P+ DAIF+KW+LHDW DEHC+K+L  CY+S+ + G
Sbjct:  170 DERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGG 292          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 1.121e-38
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D RFNK FN  M +++++ M  ILE Y GF  +  +VDVGG  G     I +KYP I  INFD PHVI+ AP    +EH+ GDMF  VPKGDAIF+KWI HDW DEHCLKLLKNCY ++P+ G
Sbjct:  172 DHRFNKVFNKGMSSNSTITMKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEHLGGDMFDGVPKGDAIFIKWICHDWSDEHCLKLLKNCYAALPDHG 294          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 1.465e-38
Identity = 70/124 (56.45%), Postives = 90/124 (72.58%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPK-GDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D RFN+ FN  M NH+ +I   +L+ Y GF     +VDVGG +G T+ A+ S++P+I+GIN+D PHVI  AP  P +EHV GDMF SVP+ GDAI +KWILHDW DEHC +LLKNCY ++PE G
Sbjct:  173 DARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHG 296          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 3.989e-36
Identity = 64/123 (52.03%), Postives = 90/123 (73.17%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            + R NK FN AM   +++    + + YKGF N+K+LVDVGG +G +L  I +K+P+I+GINF+ PHVI  AP +P +EHV GDMF+ VP    I LKW+LHDWDD+  +K+LKNC+K++PE+G
Sbjct:  184 EERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENG 306          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 6.590e-31
Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            D + N+ FN +M +  +  M  +LE Y GF  I  LVDVGG  G  L+ I SKYP IKGINFD P VIE+AP    IEHV GDMF SVP+GDA+ LK + H+W DE C++ L NC+K++  +G
Sbjct:  178 DKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNG 300          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.137e-25
Identity = 56/123 (45.53%), Postives = 79/123 (64.23%), Query Frame = 1
Query:   13 PRFNKHFNTAMYNHTSLIMSNILESYKGFAN-IKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            P  N+ FN AM N + LIMS +++      N I  LVDVGG  G  ++ I + +P+IK   +D PHVI  +P +  +  VAGDMF+ +PK DAI +K ILHDWDD+ C+++LK C ++VP  G
Sbjct:  153 PEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKG 275          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.403e-25
Identity = 57/123 (46.34%), Postives = 79/123 (64.23%), Query Frame = 1
Query:   13 PRFNKHFNTAMYNHTSLIMSNILESYKG-FANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVPEDG 378
            P  ++ FN  M   T L+ S+++   +  F  I  LVDVGG  G T++AI+  +P+IK   FD PHVI ++   P+IE + GDMF+SVP   AI LK ILHDW+DE  +K+LK C  +VP+DG
Sbjct:  157 PDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDG 279          
BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: ZRP4_MAIZE (O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.682e-24
Identity = 51/121 (42.15%), Postives = 76/121 (62.81%), Query Frame = 1
Query:   10 DPRFNKHFNTAMYNHTSLIMS-NILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAPLHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSVP 369
            D  F+   N  + + + LI+   I +S + F  I  LVDVGG +G   QAI+  +P++K    D  HV+  AP H  ++ +AGDMF+S+P  DA+ LK +LHDWD + C+K+LKNC K++P
Sbjct:  168 DATFDALVNDGLASDSQLIVDVAIKQSAEVFQGISSLVDVGGGIGAAAQAISKAFPHVKCSVLDLAHVVAKAPTHTDVQFIAGDMFESIPPADAVLLKSVLHDWDHDDCVKILKNCKKAIP 288          
The following BLAST results are available for this feature:
BLAST of CF504447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
COMT1_EUCGU4.865e-4260.98Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_MAIZE1.565e-4058.54Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
IMT1_MESCR4.553e-4055.28Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
IEMT_CLABR1.121e-3856.91(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
OMT1_ORYSJ1.465e-3856.45Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
SMT_COPJA3.989e-3652.03(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA6.590e-3152.03Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
6OMT_COPJA4.137e-2545.53(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
4OMT_COPJA5.403e-2546.343'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
ZRP4_MAIZE2.682e-2442.15O-methyltransferase ZRP4 OS=Zea mays GN=ZRP4 PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-936 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504447 ID=CF504447; Name=CF504447; organism=Citrus sinensis; type=EST; length=379bp
GGACGAGTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAA
CCATACCTCTCTGATTATGAGCAACATTCTTGAATCTTACAAGGGCTTCG
CCAACATCAAGCAACTGGTCGATGTTGGTGGCAATCTCGGCGTTACTCTT
CAAGCCATCACTTCCAAGTACCCCTATATTAAGGGCATCAATTTCGACCA
GCCTCATGTTATTGAGCATGCCCCACTACATCCACATATTGAGCATGTAG
CGGGTGATATGTTTCAAAGTGTTCCAAAAGGCGACGCCATTTTTCTGAAG
TGGATACTGCACGATTGGGACGATGAACATTGCTTGAAGTTGTTGAAGAA
TTGCTACAAAAGCGTTCCAGAAGATGGAA
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