CF504447

Overview
NameCF504447
Unique NameCF504447
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length379
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CF504447 vs. ExPASy Swiss-Prot
Match: OMT11_DICDI (Probable inactive O-methyltransferase 11 OS=Dictyostelium discoideum GN=omt11 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.742e-15
Identity = 43/119 (36.13%), Postives = 67/119 (56.30%), Query Frame = 1 
Query:   19 FNKHFNTAMYNHTSLIMSNILESYKGFANIKQLVDVGGNLGVTLQAITSKYPYIKGINFDQPHVIEHAP---LHPHIEHVAGDMFQSVPKGDAIFLKWILHDWDDEHCLKLLKNCYKSV 366
            +   FN  M  +T+ I+   L+     +  + +VD+GG+ G  + ++  +YP + GINFD   VI  +     HP ++HVAGD F+SVP+ D   +K IL  + DE C +LLK   KS+
Sbjct:  144 YKNEFNDGMIGYTTHILK-FLKGKIDLSKFETVVDIGGSHGYLIGSLLDRYPNVNGINFDTDMVINSSNEKYQHPRLKHVAGDFFKSVPEADCYLMKLILRCFSDEKCCELLKIISKSM 261
The following BLAST results are available for this feature:
BLAST of CF504447 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
OMT11_DICDI1.742e-1536.13Probable inactive O-methyltransferase 11 OS=Dictyo... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-936 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504447 ID=CF504447; Name=CF504447; organism=Citrus sinensis; type=EST; length=379bp
GGACGAGTGGACCCTAGGTTCAATAAACATTTTAACACAGCAATGTATAA
CCATACCTCTCTGATTATGAGCAACATTCTTGAATCTTACAAGGGCTTCG
CCAACATCAAGCAACTGGTCGATGTTGGTGGCAATCTCGGCGTTACTCTT
CAAGCCATCACTTCCAAGTACCCCTATATTAAGGGCATCAATTTCGACCA
GCCTCATGTTATTGAGCATGCCCCACTACATCCACATATTGAGCATGTAG
CGGGTGATATGTTTCAAAGTGTTCCAAAAGGCGACGCCATTTTTCTGAAG
TGGATACTGCACGATTGGGACGATGAACATTGCTTGAAGTTGTTGAAGAA
TTGCTACAAAAGCGTTCCAGAAGATGGAA
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