CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 9.859e-27 Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS KLQD R+VRKI LD+H+ +A AGL A Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_CARAU (Proteasome subunit alpha type-7 OS=Carassius auratus GN=psma7 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.196e-26 Identity = 57/78 (73.08%), Postives = 65/78 (83.33%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 ARYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RG D +VLGVEKKS KLQ+ R+VRKI LD H+ +A AGL A Sbjct: 3 ARYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGKDIVVLGVEKKSVAKLQEERTVRKICALDEHVCMAFAGLTA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 2.428e-25 Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 3 Query: 27 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 M RYDRAIT+FSPDGHLFQVEYA EAV+KG+ AVGVRG D IV+GVEKKS LQD R++RKI +D+H+ LA AGL A Sbjct: 1 MNRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 114.005 bits (284), Expect = 2.428e-25 Identity = 55/76 (72.37%), Postives = 65/76 (85.53%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 +RYDRAITVFSPDGHLFQVEYA EAV+KG+ AVG+RGT+ +VLGVEKKS KLQD R+VRKI LD+H+ +A A L Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVL 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_MOUSE (Proteasome subunit alpha type-7 OS=Mus musculus GN=Psma7 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.172e-25 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.172e-25 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.172e-25 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_BOVIN (Proteasome subunit alpha type-7 OS=Bos taurus GN=PSMA7 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 3.172e-25 Identity = 56/76 (73.68%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.172e-25 Identity = 54/78 (69.23%), Postives = 64/78 (82.05%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +RYDRA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + +VLGVEKKS +LQ+ R VRKI LDNH+ +A AGL A Sbjct: 3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 4.142e-25 Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EA++KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTA 78 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |