CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_HUMAN (Proteasome subunit alpha type-3 OS=Homo sapiens GN=PSMA3 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + + FSPDG +FQVEYA++AV + A+G+R D +V GVEK KL + S +++ +D H+ +A AGL A Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_BOVIN (Proteasome subunit alpha type-3 OS=Bos taurus GN=PSMA3 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + + FSPDG +FQVEYA++AV + A+G+R D +V GVEK KL + S +++ +D H+ +A AGL A Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 4.750e-13 Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRA T+FSP+G L+QV YA EAV+KG ++G++ + +V+ EK+ L D + KI ++D+HI +A AG+ Sbjct: 12 YDRAATIFSPEGDLYQVRYAFEAVKKGWTSLGIKTNEGVVIAAEKRFIGPLVDIDDIDKIYKIDDHIGVAFAGM 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.058e-12 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKST-VKLQDSRSVRKIVRLDNHIALACAGLKA 263 RYD T+FSP+G L+QVEYALE++ A+G+ +D IVL E+K T L+ S K+ +L++ IA+A AGL A Sbjct: 5 RYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTA 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 72.0182 bits (175), Expect = 1.058e-12 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R +VL K+ +L S RKI ++D+HI +A AGL A Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1A_ARATH (Proteasome subunit alpha type-1-A OS=Arabidopsis thaliana GN=PAF1 PE=1 SV=3) HSP 1 Score: 72.0182 bits (175), Expect = 1.058e-12 Identity = 37/77 (48.05%), Postives = 53/77 (68.83%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R +VL K+ +L S RKI ++D+HI +A AGL A Sbjct: 5 QYDTDVTTWSPTGRLFQVEYAMEAVKQGSAAIGLRSRSHVVLACVNKAQSEL--SSHQRKIFKVDDHIGVAIAGLTA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA2_HALVO (Proteasome subunit alpha 2 OS=Halobacterium volcanii GN=psmA2 PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.805e-12 Identity = 33/81 (40.74%), Postives = 52/81 (64.20%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 + R D YDR ++FSPDG ++QVEYA EAV++G +GVR D +VL + + +L ++ S+ K+ +LD+ + A AG Sbjct: 1 MNRNDKQAYDRGTSLFSPDGRIYQVEYAREAVKRGAPVLGVRTADGVVLAALRSTPSELMEAESIEKLHKLDDALGAATAG 81
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 3.079e-12 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 27 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 M+ +T FSP G L Q+EYA A KG A+GV+ TD +V+ EKK+T L DS ++ K+ LD+H+ +G+ Sbjct: 1 MSESSYGLTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGI 77
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 6.859e-12 Identity = 37/85 (43.53%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + R A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + +I L G+ A Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_ORYSJ (Proteasome subunit alpha type-3 OS=Oryza sativa subsp. japonica GN=PAG1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.859e-12 Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD ++T FSPDG +FQVEYA +AV VG++ D IVLGVEK T K+ S R+I + H LA AGL A Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAVDNSGTVVGIKCKDGIVLGVEKLVTSKMMLEGSNRRIHSVHWHSGLAVAGLAA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |