CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.859e-12 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD +TV+SP G L QVEYA+EAV+ G A VG++ D VL K T +L D++ RKI+ +D+H+ ++ AGL A Sbjct: 5 QYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQ--RKIIPIDDHLGISIAGLTA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_DROME (Proteasome subunit alpha type-3 OS=Drosophila melanogaster GN=Prosalpha7 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.959e-12 Identity = 33/76 (43.42%), Postives = 49/76 (64.47%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + + FSPDG +FQ++YA +AV K +G+RG D +VL VEK T KL + + +I ++ +I +A AGL A Sbjct: 8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 8.959e-12 Identity = 38/77 (49.35%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD T +SP G LFQVEYA EAV G+AAVG + D +VL K+S V Q S K+ +LD+H+ +A AGL A Sbjct: 5 QYDTNTTTWSPTGRLFQVEYANEAVNNGSAAVGAKNKDFVVLTALKRSPV-AQFSSYQEKVFKLDDHVGMAIAGLVA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_SPIOL (Proteasome subunit alpha type-3 OS=Spinacia oleracea GN=PAG1 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.170e-11 Identity = 36/76 (47.37%), Postives = 47/76 (61.84%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD ++T FSPDG +FQ+EYA +AV AVG++ D IVLGVEK K+ S R+I + H +A AGL A Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTAVGIKCKDGIVLGVEKLIQSKMMLPGSNRRIHSVHRHSGMAVAGLAA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6_ORYSJ (Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica GN=PAA1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11 Identity = 36/79 (45.57%), Postives = 50/79 (63.29%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRK-GNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDR IT+FSP+G L+QVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + +I L GL A Sbjct: 7 AGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTHLFPITKYIGLLATGLTA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 1.528e-11 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 39 DRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 D + FS +G LFQVEYA EA++ G+ +G++ + +VL VEK+ + L S+ KI+ +D+HI A +GL A Sbjct: 9 DHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6B_ARATH (Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.996e-11 Identity = 36/85 (42.35%), Postives = 52/85 (61.18%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + R A YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + ++ L G+ A Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVSHLFPVTKYLGLLATGMTA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_SCHPO (Probable proteasome subunit alpha type-4 OS=Schizosaccharomyces pombe GN=SPAC13C5.01c PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11 Identity = 35/77 (45.45%), Postives = 47/77 (61.04%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGLKA 263 YD T+FSP+G L+QVEYALEA+ A+G+ D IVL EKK T K L+ S K+ + +++ A AGL A Sbjct: 5 YDSRTTIFSPEGRLYQVEYALEAINHAGVALGIVAKDGIVLAAEKKVTSKLLEQEESAEKLYHIGDNMLCAVAGLTA 81
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.607e-11 Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD T +SP G LFQVEYA EAV G+AAVGV+G D +VL K++ V S K +LD H+ +A +GL A Sbjct: 5 QYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSYQ-EKAFKLDEHVGMAISGLVA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11 Identity = 34/77 (44.16%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVR-KGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR IT+FSP+G LFQVEYA +AV+ G ++GVRG D++ + +KK KL D SV + + ++ L G+ A Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTA 85 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |