CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_ARATH (Proteasome subunit alpha type-3 OS=Arabidopsis thaliana GN=PAG1 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.404e-11 Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD ++T FSPDG +FQ+EYA +AV VG++ D IV+GVEK K+ S R+I + H +A AGL A Sbjct: 8 YDLSVTTFSPDGRVFQIEYAAKAVDNSGTVVGIKCKDGIVMGVEKLIASKMMLPGSNRRIHSVHRHAGMAVAGLAA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11 Identity = 33/75 (44.00%), Postives = 48/75 (64.00%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 RY ++T FSP G L Q+EYAL AV +G A+G++ T+ IVL EKKS+ L D S+ KI + +I + +G+ Sbjct: 4 RYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGM 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 5.807e-11 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD +TV+SP G + Q+EYA+EAV++G+A VG++ VL K++ +L R +KI+ +DNHI ++ AGL A Sbjct: 5 QYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHR--KKILHVDNHIGISIAGLTA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_CAEEL (Proteasome subunit alpha type-4 OS=Caenorhabditis elegans GN=pas-3 PE=2 SV=2) HSP 1 Score: 65.855 bits (159), Expect = 7.584e-11 Identity = 32/78 (41.03%), Postives = 49/78 (62.82%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGLKA 263 RYD T+FSP+G L+QVEYA+EA+ +G+ ++ IV+ E+K+ K L DS K+ RL ++I+ AG+ A Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAISHAGTCLGILSSEGIVVAAERKNVHKLLDDSVMTEKVYRLSDNISCTVAGITA 81
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6_RAT (Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + R A +DR IT+FSP+G L+QVEYA +A+ +G +V VRG D V+ +KK KL DS +V + ++ +I G+ A Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6_HUMAN (Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + R A +DR IT+FSP+G L+QVEYA +A+ +G +V VRG D V+ +KK KL DS +V + ++ +I G+ A Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA6_BOVIN (Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 34/85 (40.00%), Postives = 51/85 (60.00%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVRKGN-AAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + R A +DR IT+FSP+G L+QVEYA +A+ +G +V VRG D V+ +KK KL DS +V + ++ +I G+ A Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_DICDI (Proteasome subunit alpha type-3 OS=Dictyostelium discoideum GN=psmA3 PE=2 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD ++ +SPDG LFQV+YA +AV V ++ D +VLGVEK K+ S S R++ +D H+ +A AG A Sbjct: 8 YDLYVSTYSPDGKLFQVDYANKAVENSGTLVAIKAKDGVVLGVEKLVPSKMLCSGSNRRVHHIDTHVGVAIAGFLA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_ACACA (Proteasome subunit alpha type-3 (Fragment) OS=Acanthamoeba castellanii PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 35/76 (46.05%), Postives = 46/76 (60.53%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + T FSPDG +FQVEYA +AV A+G+R D +VL VEK K+ + R+I +D H LA +GL A Sbjct: 6 YDLSSTTFSPDGRVFQVEYAAKAVDNSGTALGLRVKDGVVLAVEKLLVSKMLVPNTNRRIHTVDRHCGLAMSGLVA 81
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.905e-11 Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +YD +T +SP G LFQVEYA+EAV++G+A VG+R VL K+ +L S RK+ R+ +H +A AGL A Sbjct: 5 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSACVGLRSRTHAVLAAANKAASEL--SSHQRKVFRVADHAGVALAGLTA 79 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |