CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_TRYBB (Proteasome subunit alpha type-7 OS=Trypanosoma brucei brucei GN=PSA4 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.410e-25 Identity = 57/76 (75.00%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAVRKG AVGV+G D+I+ VEKKS KLQDSR+ RKI +LD HI LA AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVRKGLCAVGVKGKDSIIFAVEKKSVQKLQDSRTTRKIYKLDEHIYLASAGLSA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.056e-24 Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS KLQD R+VRKI LD ++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 2.056e-24 Identity = 55/76 (72.37%), Postives = 63/76 (82.89%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG + +VLGVEKKS KLQD R+VRKI LD ++ +A AGL A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTA 78
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.020e-23 Identity = 53/72 (73.61%), Postives = 61/72 (84.72%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACA 251 YDRAITVFSPDGHLFQVEYA EAV+KG+ AVGVRG D +VLGVEKKS KLQD R+VRKI LD+++ +A A Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFA 74
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 2.968e-23 Identity = 52/78 (66.67%), Postives = 63/78 (80.77%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 +RY RA+T+FSPDGHL QVEYA EAVRKG+ AVGVRG + +VLGVEK S ++Q+ R+VRKI LD H+ALA AGL A Sbjct: 3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA71_DROVI (Proteasome subunit alpha type-7-1 OS=Drosophila virilis GN=Pros28.1 PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.598e-22 Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 +RYDRA+T+FSPDG L QVEYA EAVRKG+ AVGVRG + +VLGVEKKS KLQ+ R+VRKI LD H+ +A AGL Sbjct: 3 SRYDRAVTIFSPDGRLLQVEYAQEAVRKGSTAVGVRGGNCVVLGVEKKSVAKLQEDRTVRKICVLD-HVVMAFAGL 77
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.739e-21 Identity = 45/80 (56.25%), Postives = 67/80 (83.75%), Query Frame = 3 Query: 27 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSR-SVRKIVRLDNHIALACAGLKA 263 M+ YDRA+++FSPDGH+FQVEYALEAV++G AVGV+G + +VLG E++ST+KLQD+R + K+ ++D+H+ L+ +GL A Sbjct: 1 MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRITPSKVSKIDSHVVLSFSGLNA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA73_DROME (Proteasome subunit alpha type-7-1B OS=Drosophila melanogaster GN=Pros28.1B PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 6.843e-20 Identity = 44/77 (57.14%), Postives = 59/77 (76.62%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 RYDRA+T++SPDGHL QVEYA EAVR+G+ +G+R + IV+GVEK+S LQ+ R VRKI LD+H+ + +GL A Sbjct: 4 RYDRAVTIYSPDGHLLQVEYAQEAVRRGSTVMGLRTNNAIVIGVEKRSVGDLQEERMVRKICMLDDHVVMTFSGLTA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA7_SCHPO (Probable proteasome subunit alpha type-7 OS=Schizosaccharomyces pombe GN=SPBC106.16 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 3.396e-19 Identity = 44/79 (55.70%), Postives = 59/79 (74.68%), Query Frame = 3 Query: 27 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 M+ YDRA++VFSPDG L QVEY EAVR+G A+ +RG + IV+GVE+K+ KLQ+ + +KI +DNH+ LA AGL A Sbjct: 1 MSGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMVDNHVCLAFAGLNA 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI ++D+HI A +GL A Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVA 82 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |