CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI ++D+HI A +GL A Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVA 84
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G A+G++ + +VLGV+K+ T KL + S+ K+ ++D HI A AGL A Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.875e-18 Identity = 43/76 (56.58%), Postives = 58/76 (76.32%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI ++D+HI A +GL A Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDDHIGAATSGLVA 84
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.755e-18 Identity = 43/76 (56.58%), Postives = 57/76 (75.00%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G AVG++ D +VL V+K+ T +L ++ S+ KI ++D HI A +GL A Sbjct: 7 YDRAITVFSPDGRLFQVEYAREAVKRGTTAVGIKAADGVVLLVDKRITSRLVEAESIEKIFQIDEHIGAATSGLVA 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.904e-18 Identity = 46/78 (58.97%), Postives = 58/78 (74.36%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDRAITVFSPDG LFQV+YA EAV++G AVGV+ D +VL VEK+ T KL + S KI ++D+HIA A +G+ A Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKRGATAVGVKCKDGVVLAVEKRVTSKLIEPESYEKIFQIDDHIAAASSGIIA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.904e-18 Identity = 44/84 (52.38%), Postives = 60/84 (71.43%), Query Frame = 3 Query: 12 LERFDMARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 ++ A YDRAITVFSPDG LFQVEYA EAV++G ++GV+ + IVL V+K+ T KL + +S+ KI ++D HI A +GL A Sbjct: 1 MQPLQSAGYDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVA 84
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METS3 (Proteasome subunit alpha OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=psmA PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 6.405e-18 Identity = 42/78 (53.85%), Postives = 59/78 (75.64%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDRAITVFSPDG LFQVEYA EAV++G ++G++ ++ IVL V+K++T L ++ S+ KI ++D HI A +GL A Sbjct: 7 AGYDRAITVFSPDGRLFQVEYAREAVKRGTTSIGIKCSEGIVLAVDKRTTSNLVEATSIEKIFKIDEHIGAATSGLVA 84
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METPE (Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 43/74 (58.11%), Postives = 56/74 (75.68%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAITVFSPDG L+QVEYA EAV++G AVG++ D IVL V+K+ KL + S+ KI ++DNHI +A +GL Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIEKIFKIDNHIGVASSGL 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METB6 (Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8) GN=psmA PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAITVFSPDG L+QVEYA EAV++G AVG++ D +VL V+K+ + KL +S S+ KI ++D HI +A +GL Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKAHDGVVLIVDKRVSSKLLESSSIEKIFKIDEHIGVASSGL 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 8.366e-18 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ D +VLGVEK+ T L +S SV K+ +D+HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |