CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ + +VL VEK+ T +L + S KI ++D+HIA A +G+ A Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.152e-17 Identity = 39/78 (50.00%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR ++ FSP+G LFQVEY+LEA++ G+ A+G+ + +VLGVEK++T L +S S+ KIV +D HI A +GL A Sbjct: 6 SEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 44/78 (56.41%), Postives = 57/78 (73.08%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ + +VL VEK+ T +L + S KI ++D+HIA A +G+ A Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_HALWD (Proteasome subunit alpha OS=Haloquadratum walsbyi (strain DSM 16790) GN=psmA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A+VG+R D IVL +K+S L + SV KI + D+H+ +A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASVGIRTPDGIVLAADKRSRSPLMEPTSVEKIHKTDDHVGIASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA1_HALMA (Proteasome subunit alpha 1 OS=Haloarcula marismortui GN=psmA1 PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.208e-16 Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A++GVR +D +VL V+K+ L + SV KI + D+HI +A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTSDGVVLAVDKRIRSPLMERSSVEKIHKADDHIGIASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_THEGJ (Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.060e-16 Identity = 44/78 (56.41%), Postives = 56/78 (71.79%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 A YDRAITVFSPDG LFQV YA EAV++G AVGV+ +VL VEK+ T +L + S KI ++D+HIA A +G+ A Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKGGVVLAVEKRITSRLIEPSSYEKIFQIDDHIAAAPSGIIA 85
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METMJ (Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.060e-16 Identity = 40/74 (54.05%), Postives = 57/74 (77.03%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAITVFSPDG L+QVEYA EAV++G AVG++ ++ +VL V+K+ T +L + S+ KI ++D HI +A +GL Sbjct: 9 YDRAITVFSPDGRLYQVEYAREAVKRGTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIEKIFKIDAHIGVASSGL 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 3.515e-16 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + +VL +K+S L + SV KI + D+HI +A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_NATPD (Proteasome subunit alpha OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=psmA PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 5.995e-16 Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A++G+R D +VL V+K+ L + SV KI + D+HI +A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGIRTEDGVVLVVDKRIRSPLMERTSVEKIHKADDHIGIASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_ORYSJ (Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica GN=PAE1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ D +VL VEK+ T L + SV KI+ +D HI A +GL A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKDGVVLAVEKRVTSPLLEPSSVEKIMEIDEHIGCAMSGLIA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |