CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5B_ARATH (Proteasome subunit alpha type-5-B OS=Arabidopsis thaliana GN=PAE2 PE=1 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + +VL VEK+ T L + SV KI+ +D+HI A +GL A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5A_ARATH (Proteasome subunit alpha type-5-A OS=Arabidopsis thaliana GN=PAE1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 1.336e-15 Identity = 38/76 (50.00%), Postives = 54/76 (71.05%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR + FSP+G LFQVEYA+EA++ G+ A+GV+ + +VL VEK+ T L + SV KI+ +D+HI A +GL A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDDHIGCAMSGLIA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_HALSA (Proteasome subunit alpha OS=Halobacterium salinarium GN=psmA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.278e-15 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + +VL V+K++ L + SV K+ ++D+H+ A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_HALS3 (Proteasome subunit alpha OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=psmA PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.278e-15 Identity = 37/73 (50.68%), Postives = 54/73 (73.97%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAG 254 YDR IT+FSPDG L+QVEYA EAV++G A++GVR + +VL V+K++ L + SV K+ ++D+H+ A AG Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLVVDKQTRSPLLEGSSVEKLHKIDDHVGAASAG 82
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.278e-15 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV++G A+G++ + ++L +K+ KL ++ ++ KI ++D HI A +GL A Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKRGATAIGIKCKEGVILIADKRVGSKLLEADTIEKIYKIDEHICAATSGLVA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 2.975e-15 Identity = 36/78 (46.15%), Postives = 54/78 (69.23%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+EA++ G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.886e-15 Identity = 35/74 (47.30%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAIT+FSPDG L+QV+YA EAV+KG A+G++ ++V+ EK+ L D S+ K+ +D+H+ + AGL Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGL 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.886e-15 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR + FSP+G LFQVEYA+EA++ G+ A+G++ + +VL VEK+ T L + SV KI+ +D HI A +GL A Sbjct: 8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |