CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_DROME (Proteasome subunit alpha type-5 OS=Drosophila melanogaster GN=Prosalpha5 PE=1 SV=2) HSP 1 Score: 78.5666 bits (192), Expect = 1.131e-14 Identity = 37/78 (47.44%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+EA++ G+ A+G+ + +VL VEK+ T L +V KIV +D HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGICTPEGVVLAVEKRITSPLMVPSTVEKIVEVDKHIGCATSGLMA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 1.477e-14 Identity = 39/76 (51.32%), Postives = 56/76 (73.68%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV+KG+ A+G++ ++ ++L +KK KL + S+ KI +D+++A +GL A Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.929e-14 Identity = 37/74 (50.00%), Postives = 52/74 (70.27%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAIT+FSPDG L+QV+YA EAV+KG +GV+ + +V+ EKK +L D S+ K+ LD+H+ + AGL Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGL 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14 Identity = 38/76 (50.00%), Postives = 55/76 (72.37%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDRAITVFSPDG LFQVEYA EAV+KG+ A+G++ + ++L +KK +L + S+ KI +D+++A +GL A Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T K LQ SRS K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T K LQ SRS K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T K LQ SRS K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 2.519e-14 Identity = 39/76 (51.32%), Postives = 53/76 (69.74%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+GV D +VL EKK T K LQ SRS K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 3.290e-14 Identity = 40/79 (50.63%), Postives = 54/79 (68.35%), Query Frame = 3 Query: 27 MARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 MA YDRAIT+FSP+G ++QVEYA EAV++G VGV+ +VL EK+ L DS S+ KI +D H+A + +GL A Sbjct: 6 MAGYDRAITIFSPEGKIYQVEYAGEAVKRGWPTVGVKCKAGVVLTAEKRKISALFDSSSLEKIYLIDEHVAASPSGLLA 84
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.296e-14 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYA+E + G+ A+G++ ++ + L VEK+ T L + S+ KIV +D HI A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |