CF504448
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_SULTO (Proteasome subunit alpha OS=Sulfolobus tokodaii GN=psmA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14 Identity = 37/74 (50.00%), Postives = 51/74 (68.92%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAIT+FSPDG L+QV+YA EAV+KG +GV+ +VL EK+ +L D S+ K+ LD+H+ + AGL Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKAGVVLIGEKRKATQLLDVDSIEKVFILDDHVGCSFAGL 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 7.329e-14 Identity = 36/74 (48.65%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGL 257 YDRAIT+FSPDG L+QV+YA EAV++G +GV+ +VL EK+ +L D + KI LD+H+ AGL Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKRGWTTLGVKTKSGVVLLAEKRKATQLLDVDGIEKIFMLDDHVGCTFAGL 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_DICDI (Proteasome subunit alpha type-4 OS=Dictyostelium discoideum GN=psmA4 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 9.571e-14 Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRS--VRKIVRLDNHIALACAGL 257 RYD+ T+FSP+G ++QVEYA+ A+R A VG+ D IVL EKK+T KL DS + K+ ++D H+ A AG+ Sbjct: 4 RYDQRTTIFSPEGRVYQVEYAMTAIRHAGATVGILAKDGIVLAAEKKTTAKLLDSSTSISEKMFKIDEHVVCAVAGI 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D +VL EKK T K LQ S S K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_PETHY (Proteasome subunit alpha type-4 OS=Petunia hybrida GN=PAC1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D +VL EKK T K LQ S S K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGISSKDGVVLVGEKKVTSKLLQTSTSSEKMYKIDDHVACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA4_ARATH (Proteasome subunit alpha type-4 OS=Arabidopsis thaliana GN=PAC1 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.250e-13 Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 33 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVK-LQDSRSVRKIVRLDNHIALACAGL 257 RYD T+FSP+G L+QVEYA+EA+ +A+G+ D +VL EKK T K LQ S S K+ ++D+H+A A AG+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILSKDGVVLIGEKKVTSKLLQTSTSAEKMYKIDDHVACAVAGI 79
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_TRYBB (Proteasome subunit alpha type-5 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 1.633e-13 Identity = 30/76 (39.47%), Postives = 51/76 (67.11%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YDR + FSP+G +FQ+EYA+EA++ G+ ++G++ D +++ EK+ L D SV KI+ +D+HI +G+ A Sbjct: 8 YDRGVNTFSPEGRIFQIEYAIEAIKLGSTSLGIQTPDAVIIAAEKRVPSTLVDPSSVNKILEIDHHIGTVLSGMVA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 36/78 (46.15%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 30 ARYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 + YDR + FSP+G LFQVEYALEA++ G +GV+ + +VL VEK+ T L + S++K+V +D H+ A +GL A Sbjct: 6 SEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVA 80
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_RAT (Proteasome subunit alpha type-3 OS=Rattus norvegicus GN=Psma3 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + + FSPDG +FQVEYA++AV + A+G+R D +V GVEK KL + S +++ +D H+ +A AGL A Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLA 83
BLAST of CF504448 vs. ExPASy Swiss-Prot
Match: PSA3_MOUSE (Proteasome subunit alpha type-3 OS=Mus musculus GN=Psma3 PE=1 SV=3) HSP 1 Score: 73.559 bits (179), Expect = 3.637e-13 Identity = 34/76 (44.74%), Postives = 50/76 (65.79%), Query Frame = 3 Query: 36 YDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDTIVLGVEKKSTVKLQDSRSVRKIVRLDNHIALACAGLKA 263 YD + + FSPDG +FQVEYA++AV + A+G+R D +V GVEK KL + S +++ +D H+ +A AGL A Sbjct: 8 YDLSASTFSPDGRVFQVEYAMKAVENSSTAIGIRCKDGVVFGVEKLVLSKLYEEGSNKRLFNVDRHVGMAVAGLLA 83 The following BLAST results are available for this feature:
BLAST of CF504448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 130
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504448 ID=CF504448; Name=CF504448; organism=Citrus sinensis; type=EST; length=264bpback to top |