CF504452

Overview
NameCF504452
Unique NameCF504452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length328
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13176 contig Csv1_Contig13176:309..636. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_PHAVU (Inositol-3-phosphate synthase OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.713e-50
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 3
Query:    3 YETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVN 134          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_ARATH (Inositol-3-phosphate synthase isozyme 1 OS=Arabidopsis thaliana GN=At4g39800 PE=2 SV=3)

HSP 1 Score: 196.438 bits (498), Expect = 3.713e-50
Identity = 95/109 (87.16%), Postives = 102/109 (93.58%), Query Frame = 3
Query:    3 YETTELVHENR-NGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            YETTE+VHE   NGTYQWIVKPKTVKY+FKTD+ VPKLGVMLVG GGNNGSTLT GVIAN+EGISWATKD VQQANYFGSLTQAS+IRVGS+NGEEIYAPFKS+LPMVN
Sbjct:   26 YETTEVVHEKTVNGTYQWIVKPKTVKYDFKTDIRVPKLGVMLVGLGGNNGSTLTAGVIANKEGISWATKDKVQQANYFGSLTQASSIRVGSFNGEEIYAPFKSLLPMVN 134          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_MAIZE (Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 189.504 bits (480), Expect = 4.539e-48
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHE ++G  +W+V+PK+VKY F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVN
Sbjct:   26 YDTTELVHEGKDGASRWVVRPKSVKYNFRTRTAVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 188.734 bits (478), Expect = 7.742e-48
Identity = 88/108 (81.48%), Postives = 98/108 (90.74%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHE+ +G  +WIV+PK+V+Y F+T   VPKLGVMLVGWGGNNGSTLT GVIANREGISWATKD VQQANY+GSLTQAS IRVGSYNGEEIYAPFKS+LPMVN
Sbjct:   26 YDTTELVHESHDGASRWIVRPKSVRYNFRTTTTVPKLGVMLVGWGGNNGSTLTAGVIANREGISWATKDKVQQANYYGSLTQASTIRVGSYNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_HORVU (Inositol-3-phosphate synthase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 1.011e-47
Identity = 88/108 (81.48%), Postives = 97/108 (89.81%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TTELVHE+ +G  +W+V+PK+V Y FKT+  VPKLGVMLVGWGGNNGSTL  GVIANREGISWATKD VQQANYFGSLTQAS IRVGSYNGEEIYAPFKS+LPMVN
Sbjct:   26 YDTTELVHESHDGASKWVVRPKSVNYHFKTNTTVPKLGVMLVGWGGNNGSTLMAGVIANREGISWATKDKVQQANYFGSLTQASTIRVGSYNGEEIYAPFKSLLPMVN 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1B_XENLA (Inositol-3-phosphate synthase 1-B OS=Xenopus laevis GN=isyna1-B PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 5.399e-25
Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S + +G  +  E++ PF+ +LPMVN
Sbjct:   25 YDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTVCLGRGSSGEVFVPFRDLLPMVN 128          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1A_XENLA (Inositol-3-phosphate synthase 1-A OS=Xenopus laevis GN=isyna1-A PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.796e-24
Identity = 55/108 (50.93%), Postives = 76/108 (70.37%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGSYNGEEIYAPFKSILPMVN 326
            Y+TT+ V+E +  T    VKP + K+ F T+  VPKLGVMLVGWGGNNG+T+T  V+ANR G+SW TK   + ANY+GSL Q+S   +GS    +++ PF+ +LPMV+
Sbjct:   25 YDTTQ-VYEEKGVTK---VKPCSTKFTFHTERKVPKLGVMLVGWGGNNGTTVTAAVLANRLGLSWMTKTGKKVANYYGSLFQSSTACLGSGPAGDVFVPFRDLLPMVH 128          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_DROME (Inositol-3-phosphate synthase OS=Drosophila melanogaster GN=Inos PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.018e-23
Identity = 54/108 (50.00%), Postives = 72/108 (66.67%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVGS-YNGEEIYAPFKSILPMV 323
            Y+T+   H  R    Q  V P+T   + +T  HVPKLGVMLVGWGGNNGSTLT  + ANR  + W  +  VQ+AN++GS+TQAS + +GS  +G ++Y P K +LPMV
Sbjct:   29 YQTS---HVKRTADGQLQVHPQTTSLKIRTGRHVPKLGVMLVGWGGNNGSTLTAALEANRRQLKWRKRTGVQEANWYGSITQASTVFIGSDEDGGDVYVPMKELLPMV 133          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_CANAL (Inositol-3-phosphate synthase OS=Candida albicans GN=INO1 PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.330e-23
Identity = 54/110 (49.09%), Postives = 77/110 (70.00%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG--SYNGEEIYAPFKSILPMVN 326
            YE + +V ++ NG +  IV P    YEFK D+ VPK+G++LVG GGNNG+TL G  +AN+  IS+  K+ V + NY+GS+TQAS +++G     GE++Y PF SI+PMVN
Sbjct:   25 YENS-VVEKDANGKF--IVTPTASDYEFKVDLKVPKVGLLLVGIGGNNGTTLLGATLANKHNISFENKEGVVKPNYYGSVTQASTVKIGVDKETGEDVYVPFNSIVPMVN 131          
BLAST of CF504452 vs. ExPASy Swiss-Prot
Match: INO1_MOUSE (Inositol-3-phosphate synthase 1 OS=Mus musculus GN=Isyna1 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.737e-23
Identity = 53/108 (49.07%), Postives = 74/108 (68.52%), Query Frame = 3
Query:    3 YETTELVHENRNGTYQWIVKPKTVKYEFKTDVHVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDTVQQANYFGSLTQASAIRVG-SYNGEEIYAPFKSILPMV 323
            Y TT +  E   G  +  V+P+  ++ F+T   VP+LGVMLVGWGGNNGSTLT  V+ANR  ++W T+   ++ANY+GSLTQA  + +G   NG E++ PF ++LPMV
Sbjct:   27 YRTTRVSREG--GVLR--VQPRATRFTFRTARQVPRLGVMLVGWGGNNGSTLTAAVLANRLRLTWPTRTGRKEANYYGSLTQAGTVNLGLDENGREVFVPFSALLPMV 130          
The following BLAST results are available for this feature:
BLAST of CF504452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
INO1_PHAVU3.713e-5087.16Inositol-3-phosphate synthase OS=Phaseolus vulgari... [more]
INO1_ARATH3.713e-5087.16Inositol-3-phosphate synthase isozyme 1 OS=Arabido... [more]
INO1_MAIZE4.539e-4881.48Inositol-3-phosphate synthase OS=Zea mays PE=2 SV=... [more]
INO1_ORYSJ7.742e-4881.48Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]
INO1_HORVU1.011e-4781.48Inositol-3-phosphate synthase OS=Hordeum vulgare P... [more]
INO1B_XENLA5.399e-2551.85Inositol-3-phosphate synthase 1-B OS=Xenopus laevi... [more]
INO1A_XENLA7.796e-2450.93Inositol-3-phosphate synthase 1-A OS=Xenopus laevi... [more]
INO1_DROME1.018e-2350.00Inositol-3-phosphate synthase OS=Drosophila melano... [more]
INO1_CANAL1.330e-2349.09Inositol-3-phosphate synthase OS=Candida albicans ... [more]
INO1_MOUSE1.737e-2349.07Inositol-3-phosphate synthase 1 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-941 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_E03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504452 ID=CF504452; Name=CF504452; organism=Citrus sinensis; type=EST; length=328bp
ATTATGAAACCACTGAGCTTGTTCATGAGAACAGAAATGGCACTTATCAG
TGGATTGTCAAGCCCAAAACTGTCAAATATGAGTTCAAAACCGATGTTCA
TGTCCCTAAACTTGGGGTTATGCTTGTGGGTTGGGGTGGAAACAACGGCT
CAACTCTCACGGGTGGTGTTATCGCGAATCGAGAGGGAATCTCCTGGGCC
ACAAAGGACACAGTGCAACAAGCCAATTATTTTGGTTCACTTACCCAAGC
ATCAGCAATTAGAGTTGGGTCTTACAATGGAGAGGAGATTTATGCTCCAT
TCAAGAGCATTCTCCCTATGGTGAACCC
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