CF504462

Overview
NameCF504462
Unique NameCF504462
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length357
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3352 contig Csv1_Contig3352:20..376. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.789e-28
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 KKWTTKNTGSA--TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+  +A    +R F  F  +PI ++    MN +KD++  +L+KL + +K EEK+L GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DDQ+   IR CDP
Sbjct:  255 KKWTNKDKDAAGKPLERAFNMFVLDPIFRLFAAIMNFKKDEIPVLLEKLEINLKREEKELEGKALLKVVMRKFLPAADALLEMIVLHLPSPVTAQAYRAETLYEGPSDDQFCIGIRECDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_DEBHA (Elongation factor 2 OS=Debaryomyces hansenii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.336e-28
Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = 2
Query:    2 KKWTTKNTGSA--TCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+  +   T +R F  F  +PI ++ ++ MN +K ++  +L+KL + +K+EEK+L GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+NCDP
Sbjct:  255 KKWTNKDKDAEGKTLERAFNMFVLDPIFRLFSSIMNFKKSEIPTLLEKLEINLKAEEKELEGKALLKVVMRKFLPAADALLEMIVIHLPSPVTAQAYRAETLYEGPADDASCIAIKNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_CANGA (Elongation factor 2 OS=Candida glabrata GN=EFT1 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 2.336e-28
Identity = 62/120 (51.67%), Postives = 82/120 (68.33%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K T +     +R F  F  +PI ++    MN +KD++  +L+KL + +KS+EKDL GKAL+K VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD    AI+ CDP
Sbjct:  255 KKWTNKETDTDGKPLERAFNMFVLDPIFRLFAAIMNFKKDEIPTLLEKLEINLKSDEKDLEGKALLKVVMRKFLPAADALLEMIVMHLPSPVTAQNYRAEQLYEGPADDANCIAIKKCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_ASHGO (Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 5.204e-28
Identity = 62/120 (51.67%), Postives = 83/120 (69.17%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K+  +     +R F  F  +PI ++    MN +KD++  +L+KL + +KS+E+DL GKAL+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP
Sbjct:  255 KKWTNKDRDADGKPLERAFNMFVLDPIFRLFAAIMNFKKDEIPVLLEKLEIALKSDERDLEGKALLKVVMRKFLPAADALLEMIIMHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_BLAHO (Elongation factor 2 OS=Blastocystis hominis PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.373e-27
Identity = 60/118 (50.85%), Postives = 74/118 (62.71%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KK   K  G    KR FVQF  +P+  +       + +K   ML  LGVT+ SEEKDL  KAL+KRVM  WLPA+ ALLEM++ HLPSP  AQKYR   LY+GP DD+   A++ CDP
Sbjct:  279 KKDERKAQGKKPLKRAFVQFVLDPVYGLYRALNEGRTEKYMKMLDTLGVTLTSEEKDLRDKALVKRVMSKWLPAADALLEMIVLHLPSPVDAQKYRAPLLYDGPEDDEACTAMKKCDP 396          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.406e-27
Identity = 56/119 (47.06%), Postives = 75/119 (63.03%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCD 352
            KKW     G      +RGFVQFC++PI ++ N  M  +K     ML  L + + +++K+  GK L+K VM+ WLPA   LLEM++ HLPSP  AQKYR  NLY GP+DD+ A A+ NCD
Sbjct:  253 KKWKKNGKGDHGEVLQRGFVQFCFDPITKLFNAIMEGRKADYEKMLTNLQIKLSADDKEKEGKELLKTVMKLWLPAGVTLLEMIVLHLPSPVVAQKYRTSNLYTGPMDDEAAKAMANCD 371          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.674e-26
Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 2
Query:    2 KKWTTKNTGS--ATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K T +     +R F  F  +PI ++    MN +KD++  +L+KL + +K +EKD  GKAL+K VM+ +LPA+ ALLEM++ +LPSP TAQ YR E LYEGP DD    AI+ CDP
Sbjct:  255 KKWTNKETDADGKQLERAFNMFVLDPIFRLFAAIMNFKKDEIPVLLEKLEINLKGDEKDQEGKALLKTVMKKFLPAADALLEMIVMNLPSPVTAQAYRAEQLYEGPADDANCMAIKRCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 2.856e-26
Identity = 58/119 (48.74%), Postives = 80/119 (67.23%), Query Frame = 2
Query:    2 KKWTTKNTGSAT-CKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT   T      +R F QF  +PI +I +  MN +KD++  +L+KL + + +++++  GK L+K VM+ +LPA+  LLEMMI HLPSP TAQ YR E LYEGP DD+ A AI+ CDP
Sbjct:  257 KKWTKNGTYEGKELERAFNQFILDPIFKIFSAVMNFKKDEVAALLEKLNLKLATDDREKEGKQLLKAVMKAFLPAADCLLEMMILHLPSPVTAQAYRAETLYEGPQDDEAAMAIKTCDP 375          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_KLULA (Elongation factor 2 OS=Kluyveromyces lactis GN=EFT1 PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.856e-26
Identity = 59/120 (49.17%), Postives = 80/120 (66.67%), Query Frame = 2
Query:    2 KKWTTK--NTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKWT K  +      +R F  F  +PI ++    MN +K+++  +L+KL + +K +EK+L GK L+K VM+ +LPA+ ALLEM+I HLPSP TAQ YR E LYEGP DD    AI+NCDP
Sbjct:  255 KKWTNKERDADGKPLERAFNMFVLDPIFRLFAAIMNFKKEEIPVLLEKLEINLKGDEKELEGKNLLKVVMRKFLPAADALLEMIILHLPSPVTAQNYRAEQLYEGPSDDPACIAIKNCDP 374          
BLAST of CF504462 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.730e-26
Identity = 56/118 (47.46%), Postives = 81/118 (68.64%), Query Frame = 2
Query:    2 KKWTTKNTGSATCKRGFVQFCYEPIKQIINTCMNDQKDKLWPMLQKLGVTMKSEEKDLMGKALMKRVMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDP 355
            KKW+ +       KR F  +  +PI ++ +  M  +K+++  +L+K+GVT+K E+ D  GKAL+K VM++WLPA  ALL+M+  HLPSP  AQKYR+E LYEGP DD+ A  I++CDP
Sbjct:  261 KKWSKQKDDDN--KRSFCMYVLDPIYKVFDAIMKFKKEEIDDLLKKIGVTIKHEDSDKDGKALLKVVMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDP 376          
The following BLAST results are available for this feature:
BLAST of CF504462 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
EF2_PICPA1.789e-2851.67Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]
EF2_DEBHA2.336e-2850.83Elongation factor 2 OS=Debaryomyces hansenii GN=EF... [more]
EF2_CANGA2.336e-2851.67Elongation factor 2 OS=Candida glabrata GN=EFT1 PE... [more]
EF2_ASHGO5.204e-2851.67Elongation factor 2 OS=Ashbya gossypii GN=EFT1 PE=... [more]
EF2_BLAHO3.373e-2750.85Elongation factor 2 OS=Blastocystis hominis PE=2 S... [more]
EF2_ENTHI4.406e-2747.06Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_SACCA1.674e-2649.17Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_NEUCR2.856e-2648.74Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_KLULA2.856e-2649.17Elongation factor 2 OS=Kluyveromyces lactis GN=EFT... [more]
EF2_BOMMO3.730e-2647.46Translation elongation factor 2 OS=Bombyx mori GN=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-951 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504462 ID=CF504462; Name=CF504462; organism=Citrus sinensis; type=EST; length=357bp
AAAGAAGTGGACAACCAAGAACACTGGTAGTGCGACATGCAAGCGTGGTT
TTGTTCAGTTTTGCTATGAACCGATTAAGCAGATTATCAACACTTGCATG
AATGATCAGAAAGATAAGCTGTGGCCCATGTTGCAAAAGCTTGGTGTCAC
GATGAAGTCAGAAGAGAAGGATTTGATGGGCAAGGCATTGATGAAGCGTG
TCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATGATC
TTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAACTT
GTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACTGTG
ATCCTAA
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