CF504466

Overview
NameCF504466
Unique NameCF504466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length221
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK6_ARATH (Probable serine/threonine-protein kinase WNK6 OS=Arabidopsis thaliana GN=WNK6 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.023e-28
Identity = 54/73 (73.97%), Postives = 65/73 (89.04%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIF+NGN GEVKIGDLGLA ++ +++A   +GTPEFMAPE+Y+E YNEL DIYSFGMC+LEMV
Sbjct:  151 PIIHRDLKCDNIFINGNHGEVKIGDLGLATVMEQANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMV 223          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK5_ARATH (Probable serine/threonine-protein kinase WNK5 OS=Arabidopsis thaliana GN=WNK5 PE=1 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 1.023e-28
Identity = 61/74 (82.43%), Postives = 67/74 (90.54%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNG+ G+VKIGDLGLAAILR S  A  V GTPEFMAPE+YEE+YNELVDIYSFGMC+LEM+
Sbjct:  148 PVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQNAHSVIGTPEFMAPELYEEDYNELVDIYSFGMCVLEML 221          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK7_ARATH (Probable serine/threonine-protein kinase WNK7 OS=Arabidopsis thaliana GN=WNK7 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 1.745e-28
Identity = 53/73 (72.60%), Postives = 65/73 (89.04%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRD+KCDNIF+NGN GEVKIGDLGLA ++ +++A   +GTPEFMAPE+Y+E YNEL DIYSFGMC+LEMV
Sbjct:  151 PIIHRDIKCDNIFINGNHGEVKIGDLGLATVMEQANAKSVIGTPEFMAPELYDENYNELADIYSFGMCMLEMV 223          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK4_ARATH (Probable serine/threonine-protein kinase WNK4 OS=Arabidopsis thaliana GN=WNK4 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 6.632e-28
Identity = 56/74 (75.68%), Postives = 65/74 (87.84%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAR-CVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            PVIHRDLKCDNIFVNG+ G+VKIGDLGLA +LR  H+A   +GTPEFMAPE+YEE YNEL+D+YSFGMC LEM+
Sbjct:  142 PVIHRDLKCDNIFVNGHLGQVKIGDLGLARMLRDCHSAHSIIGTPEFMAPELYEENYNELIDVYSFGMCFLEMI 215          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK4_ORYSJ (Probable serine/threonine-protein kinase WNK4 OS=Oryza sativa subsp. japonica GN=WNK4 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.930e-27
Identity = 54/72 (75.00%), Postives = 62/72 (86.11%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIFVNGN GEVKIGDLGLA ++    A   +GTPEFMAPE+Y+E Y+ELVDIYSFGMC+LEM
Sbjct:  148 PIIHRDLKCDNIFVNGNHGEVKIGDLGLATVMLTPRAKSVIGTPEFMAPELYDENYDELVDIYSFGMCMLEM 219          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK11_ARATH (Probable serine/threonine-protein kinase WNK11 OS=Arabidopsis thaliana GN=WNK11 PE=2 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 1.059e-25
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 3
Query:    6 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            +IHRDL C NIFVNGN G+VKIGDLGLAAI+ K+H A  + GTPEFMAPE+YEE Y E+VDIYS+GMC+LE+V
Sbjct:  155 IIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGKNHLAHSILGTPEFMAPELYEENYTEMVDIYSYGMCVLELV 227          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK3_MOUSE (Serine/threonine-protein kinase WNK3 OS=Mus musculus GN=Wnk3 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.359e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA ++R S A   +GTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM
Sbjct:  269 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLMRTSFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 340          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK3_HUMAN (Serine/threonine-protein kinase WNK3 OS=Homo sapiens GN=WNK3 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.359e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA ++R S A   +GTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM
Sbjct:  270 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLMRTSFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 341          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_RAT (Serine/threonine-protein kinase WNK1 OS=Rattus norvegicus GN=Wnk1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.255e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  344 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEM 415          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_MOUSE (Serine/threonine-protein kinase WNK1 OS=Mus musculus GN=Wnk1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.255e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  344 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEM 415          
The following BLAST results are available for this feature:
BLAST of CF504466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
WNK6_ARATH1.023e-2873.97Probable serine/threonine-protein kinase WNK6 OS=A... [more]
WNK5_ARATH1.023e-2882.43Probable serine/threonine-protein kinase WNK5 OS=A... [more]
WNK7_ARATH1.745e-2872.60Probable serine/threonine-protein kinase WNK7 OS=A... [more]
WNK4_ARATH6.632e-2875.68Probable serine/threonine-protein kinase WNK4 OS=A... [more]
WNK4_ORYSJ1.930e-2775.00Probable serine/threonine-protein kinase WNK4 OS=O... [more]
WNK11_ARATH1.059e-2572.60Probable serine/threonine-protein kinase WNK11 OS=... [more]
WNK3_MOUSE2.359e-2569.44Serine/threonine-protein kinase WNK3 OS=Mus muscul... [more]
WNK3_HUMAN2.359e-2569.44Serine/threonine-protein kinase WNK3 OS=Homo sapie... [more]
WNK1_RAT5.255e-2569.44Serine/threonine-protein kinase WNK1 OS=Rattus nor... [more]
WNK1_MOUSE5.255e-2569.44Serine/threonine-protein kinase WNK1 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-955 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504466 ID=CF504466; Name=CF504466; organism=Citrus sinensis; type=EST; length=221bp
CACCGGTGATTCATAGAGATCTCAAATGTGACAATATTTTTGTCAATGGA
AACCAAGGGGAAGTCAAGATTGGGGATCTTGGCCTTGCTGCAATCCTCCG
CAAATCTCATGCTGCTCGTTGTGTTGGAACGCCAGAGTTTATGGCCCCTG
AAGTGTATGAAGAGGAATACAATGAATTAGTCGATATATACTCTTTCGGA
ATGTGCATCTTGGAGATGGTC
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