CF504466

Overview
NameCF504466
Unique NameCF504466
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length221
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK1_HUMAN (Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.255e-25
Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  344 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEM 415          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK5_ORYSJ (Probable serine/threonine-protein kinase WNK5 OS=Oryza sativa subsp. japonica GN=WNK5 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.863e-25
Identity = 51/73 (69.86%), Postives = 61/73 (83.56%), Query Frame = 3
Query:    6 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            +IHRDL C N+F+NGN G+VKIGDLGLAAI+ K+H A  + GTPEFMAPE+Y E Y E VDIYS+GMC+LEMV
Sbjct:  180 IIHRDLNCSNVFINGNTGQVKIGDLGLAAIVDKTHVAHTILGTPEFMAPELYTETYTESVDIYSYGMCVLEMV 252          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK4_RAT (Serine/threonine-protein kinase WNK4 OS=Rattus norvegicus GN=Wnk4 PE=2 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 6.863e-25
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P++HRDLKCDN+F+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  294 PILHRDLKCDNVFITGPSGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEM 365          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK4_MOUSE (Serine/threonine-protein kinase WNK4 OS=Mus musculus GN=Wnk4 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.863e-25
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P++HRDLKCDN+F+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  294 PILHRDLKCDNVFITGPSGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEM 365          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK2_MOUSE (Serine/threonine-protein kinase WNK2 OS=Mus musculus GN=Wnk2 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 6.863e-25
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM
Sbjct:  318 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 389          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK2_HUMAN (Serine/threonine-protein kinase WNK2 OS=Homo sapiens GN=WNK2 PE=1 SV=4)

HSP 1 Score: 112.464 bits (280), Expect = 6.863e-25
Identity = 50/72 (69.44%), Postives = 59/72 (81.94%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P+IHRDLKCDNIF+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE Y+E VD+Y+FGMC+LEM
Sbjct:  318 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEHYDESVDVYAFGMCMLEM 389          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK4_HUMAN (Serine/threonine-protein kinase WNK4 OS=Homo sapiens GN=WNK4 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 8.963e-25
Identity = 48/72 (66.67%), Postives = 60/72 (83.33%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEM 218
            P++HRDLKCDN+F+ G  G VKIGDLGLA + R S A   +GTPEFMAPE+YEE+Y+E VD+Y+FGMC+LEM
Sbjct:  297 PILHRDLKCDNVFITGPTGSVKIGDLGLATLKRASFAKSVIGTPEFMAPEMYEEKYDEAVDVYAFGMCMLEM 368          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK6_ORYSJ (Probable serine/threonine-protein kinase WNK6 OS=Oryza sativa subsp. japonica GN=WNK6 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.171e-24
Identity = 50/73 (68.49%), Postives = 60/73 (82.19%), Query Frame = 3
Query:    3 PVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCVGTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            P+IHRDLKCDNIF+NGN G+VKIGD GLA ++++       GT EFMAPE++ E YNELVDIYSFGMC+LEMV
Sbjct:  159 PIIHRDLKCDNIFINGNHGKVKIGDFGLAMVMQQRKTRSIQGTIEFMAPELFGENYNELVDIYSFGMCMLEMV 231          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK8_ORYSJ (Probable serine/threonine-protein kinase WNK8 OS=Oryza sativa subsp. japonica GN=WNK8 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.448e-24
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 3
Query:    6 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            VIHRDLKCDNIFVNG+ G+VKIGDLGLAA+LR   +AR V GTPEFMAPE+Y+E Y   VD+YSFGMC+LEM+
Sbjct:  157 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAVLRGCTSARSVIGTPEFMAPEMYDECYGVGVDVYSFGMCMLEML 229          
BLAST of CF504466 vs. ExPASy Swiss-Prot
Match: WNK7_ORYSJ (Probable serine/threonine-protein kinase WNK7 OS=Oryza sativa subsp. japonica GN=WNK7 PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.448e-24
Identity = 54/73 (73.97%), Postives = 63/73 (86.30%), Query Frame = 3
Query:    6 VIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAARCV-GTPEFMAPEVYEEEYNELVDIYSFGMCILEMV 221
            VIHRDLKCDNIFVNG+ G+VKIGDLGLAA+LR   +AR V GTPEFMAPE+Y+E Y   VD+YSFGMC+LEM+
Sbjct:  157 VIHRDLKCDNIFVNGHLGQVKIGDLGLAAVLRGCASARSVIGTPEFMAPEMYDECYGVGVDVYSFGMCMLEML 229          
The following BLAST results are available for this feature:
BLAST of CF504466 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
WNK1_HUMAN5.255e-2569.44Serine/threonine-protein kinase WNK1 OS=Homo sapie... [more]
WNK5_ORYSJ6.863e-2569.86Probable serine/threonine-protein kinase WNK5 OS=O... [more]
WNK4_RAT6.863e-2566.67Serine/threonine-protein kinase WNK4 OS=Rattus nor... [more]
WNK4_MOUSE6.863e-2566.67Serine/threonine-protein kinase WNK4 OS=Mus muscul... [more]
WNK2_MOUSE6.863e-2569.44Serine/threonine-protein kinase WNK2 OS=Mus muscul... [more]
WNK2_HUMAN6.863e-2569.44Serine/threonine-protein kinase WNK2 OS=Homo sapie... [more]
WNK4_HUMAN8.963e-2566.67Serine/threonine-protein kinase WNK4 OS=Homo sapie... [more]
WNK6_ORYSJ1.171e-2468.49Probable serine/threonine-protein kinase WNK6 OS=O... [more]
WNK8_ORYSJ4.448e-2473.97Probable serine/threonine-protein kinase WNK8 OS=O... [more]
WNK7_ORYSJ4.448e-2473.97Probable serine/threonine-protein kinase WNK7 OS=O... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-955 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504466 ID=CF504466; Name=CF504466; organism=Citrus sinensis; type=EST; length=221bp
CACCGGTGATTCATAGAGATCTCAAATGTGACAATATTTTTGTCAATGGA
AACCAAGGGGAAGTCAAGATTGGGGATCTTGGCCTTGCTGCAATCCTCCG
CAAATCTCATGCTGCTCGTTGTGTTGGAACGCCAGAGTTTATGGCCCCTG
AAGTGTATGAAGAGGAATACAATGAATTAGTCGATATATACTCTTTCGGA
ATGTGCATCTTGGAGATGGTC
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