CF504477

Overview
NameCF504477
Unique NameCF504477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length309
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIDS (S-formylglutathione hydrolase yeiG OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFQGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_SHIBS (S-formylglutathione hydrolase yeiG OS=Shigella boydii serotype 4 (strain Sb227) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOUT (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain UTI89 / UPEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOLI (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain K12) GN=yeiG PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOLC (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL6 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6 GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOL5 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOK1 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O1:K1 / APEC GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOHS (S-formylglutathione hydrolase yeiG OS=Escherichia coli O9:H4 (strain HS) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
[Close]
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECODH (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain K12 / DH10B) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1 
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73
The following BLAST results are available for this feature:
BLAST of CF504477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SFGH2_SHIDS1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Shigella dys... [more]
SFGH2_SHIBS1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Shigella boy... [more]
SFGH2_ECOUT1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOLI1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOLC1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOL61.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOL51.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOK11.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOHS1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECODH1.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-966 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504477 ID=CF504477; Name=CF504477; organism=Citrus sinensis; type=EST; length=309bp
CACTCTTTAATCTGCTGAAAGAACAAAGATCGTACACACACAGGGCGAGC
TCAACACAATCAATCACAGAGAAAAATGGAGACGAAGCCGACAGAGATAA
GCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATTCAAGCATTTCAGT
ACAACACTGGGCTGCTCCATGAATTTCCACATCTACTTCCCTCCTTCTTC
TTCTCCATCCTACAAATTCCCTGTGCTTTACTGGCTCTCTGGTCTTACCT
GCACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCAACGTGCTGCTTCC
GCTGAAGGT
back to top