CF504477

Overview
NameCF504477
Unique NameCF504477
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length309
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO57 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O157:H7 GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.957e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73          
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECO24 (S-formylglutathione hydrolase yeiG OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.556e-11
Identity = 33/71 (46.48%), Postives = 43/71 (60.56%), Query Frame = 1
Query:   97 ISSSKMFGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            +   + F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:    4 LEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTIKAGAQRVAAELG 73          
BLAST of CF504477 vs. ExPASy Swiss-Prot
Match: SFGH2_ECOSM (S-formylglutathione hydrolase yeiG OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=yeiG PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.339e-11
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1
Query:  115 FGGYNKRFKHFSTTLGCSMNFHIYFXXXXXXXYKFPVLYWLSGLTCTDENFIAKSGAQRAASAEG 309
            F G+ +R++H S+TL C M F I+           PVLYWLSGLTC DENF  K+GAQR A+  G
Sbjct:   10 FEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPP-PVLYWLSGLTCNDENFTTKAGAQRVAAELG 73          
The following BLAST results are available for this feature:
BLAST of CF504477 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
SFGH2_ECO571.957e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECO242.556e-1146.48S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]
SFGH2_ECOSM3.339e-1150.77S-formylglutathione hydrolase yeiG OS=Escherichia ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-966 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504477 ID=CF504477; Name=CF504477; organism=Citrus sinensis; type=EST; length=309bp
CACTCTTTAATCTGCTGAAAGAACAAAGATCGTACACACACAGGGCGAGC
TCAACACAATCAATCACAGAGAAAAATGGAGACGAAGCCGACAGAGATAA
GCAGTTCTAAGATGTTCGGTGGATACAACAAAAGATTCAAGCATTTCAGT
ACAACACTGGGCTGCTCCATGAATTTCCACATCTACTTCCCTCCTTCTTC
TTCTCCATCCTACAAATTCCCTGTGCTTTACTGGCTCTCTGGTCTTACCT
GCACTGATGAAAATTTTATAGCTAAGTCAGGAGCTCAACGTGCTGCTTCC
GCTGAAGGT
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