CF504485

Overview
NameCF504485
Unique NameCF504485
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length351
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HS904_HUMAN (Putative heat shock protein HSP 90-alpha A4 OS=Homo sapiens GN=HSP90AA4P PE=5 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.289e-30
Identity = 68/103 (66.02%), Postives = 76/103 (73.79%), Query Frame = 3
Query:   54 EYAAFYKSLTNDLGGAPWP----VKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            EY  FYKSLT +     W     VKHFSVEGQLEF+A LFVP+ APF+L +TRKK N IKL  RR  IMDNCEELIPEYL F++G+ DSEDLPLNI RET  Q
Sbjct:  112 EYREFYKSLTIN-----WEDYLAVKHFSVEGQLEFRAFLFVPRLAPFELLETRKKKNKIKLSARRDLIMDNCEELIPEYLNFIRGVVDSEDLPLNIFRETKDQ 209          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HTPG_PELPD (Chaperone protein htpG OS=Pelobacter propionicus (strain DSM 2379) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 9.556e-30
Identity = 62/116 (53.45%), Postives = 82/116 (70.69%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  K IW R   E+T+EEY  FYK +++D    P+   HFS EG  EFKA++++P + PFDLF   +K   ++LYV+RVFI D CEEL+P+YL FVKG+ DS DLPLN+SRE LQ+
Sbjct:  240 NSMKAIWARPKSEVTEEEYQEFYKHISHDFEN-PFNTIHFSAEGISEFKALIYLPAKKPFDLFMADRK-KGLQLYVKRVFITDRCEELLPDYLRFVKGVVDSSDLPLNVSREILQE 353          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HTPG_GEOSL (Chaperone protein htpG OS=Geobacter sulfurreducens GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.248e-29
Identity = 62/116 (53.45%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  K IW R   E+T+EEY  FYK +++D    P    H+S EG  EFKA+L++P   PFDLF   +K   ++LYVRRVFI D+CE+L+P+YL FVKG+ DS DLPLN+SRE LQ+
Sbjct:  241 NSMKAIWTRSKSEVTEEEYEEFYKHVSHDFE-KPLKTIHYSAEGTSEFKALLYLPAHKPFDLFMPERK-KGVQLYVRRVFITDSCEQLLPDYLRFVKGVVDSSDLPLNVSREILQE 354          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: HTPG_GEOMG (Chaperone protein htpG OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=htpG PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.248e-29
Identity = 63/116 (54.31%), Postives = 81/116 (69.83%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDTRKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  K IW R   E+T+EEY  FYK +++D    P    H+S EG  EFKA+L++P   PFDLF   +K   ++LYVRRVFI D+CE+LIP+YL FVKG+ DS DLPLN+SRE LQ+
Sbjct:  241 NSMKAIWARAKSEVTEEEYEEFYKHVSHDFE-KPLKTIHYSAEGVSEFKALLYLPAHKPFDLFMPERK-KGVQLYVRRVFITDSCEQLIPDYLRFVKGVVDSSDLPLNVSREILQE 354          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_RAT (Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_PONAB (Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_MOUSE (Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_MACFA (Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_HUMAN (Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
BLAST of CF504485 vs. ExPASy Swiss-Prot
Match: ENPL_BOVIN (Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 1.630e-29
Identity = 65/118 (55.08%), Postives = 84/118 (71.19%), Query Frame = 3
Query:    3 NKQKPIWMRKPEEITKEEYAAFYKSLTNDLGGAPWPVKHFSVEGQLEFKAILFVPKRAPFDLFDT--RKKPNNIKLYVRRVFIMDNCEELIPEYLGFVKGIGDSEDLPLNISRETLQQ 350
            N  KPIW R  +E+ ++EY AFYKS + +    P    HF+ EG++ FK+ILFVP  AP  LFD    KK + IKLYVRRVFI D+  +++P+YL FVKG+ DS+DLPLN+SRETLQQ
Sbjct:  337 NDIKPIWQRPSKEVEEDEYKAFYKSFSKE-SDDPMAYIHFTAEGEVTFKSILFVPTSAPRGLFDEYGSKKSDYIKLYVRRVFITDDFHDMMPKYLNFVKGVVDSDDLPLNVSRETLQQ 453          
The following BLAST results are available for this feature:
BLAST of CF504485 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 379
Match NameE-valueIdentityDescription
HS904_HUMAN4.289e-3066.02Putative heat shock protein HSP 90-alpha A4 OS=Hom... [more]
HTPG_PELPD9.556e-3053.45Chaperone protein htpG OS=Pelobacter propionicus (... [more]
HTPG_GEOSL1.248e-2953.45Chaperone protein htpG OS=Geobacter sulfurreducens... [more]
HTPG_GEOMG1.248e-2954.31Chaperone protein htpG OS=Geobacter metallireducen... [more]
ENPL_RAT1.630e-2955.08Endoplasmin OS=Rattus norvegicus GN=Hsp90b1 PE=1 S... [more]
ENPL_PONAB1.630e-2955.08Endoplasmin OS=Pongo abelii GN=HSP90B1 PE=2 SV=1[more]
ENPL_MOUSE1.630e-2955.08Endoplasmin OS=Mus musculus GN=Hsp90b1 PE=1 SV=2[more]
ENPL_MACFA1.630e-2955.08Endoplasmin OS=Macaca fascicularis GN=HSP90B1 PE=2... [more]
ENPL_HUMAN1.630e-2955.08Endoplasmin OS=Homo sapiens GN=HSP90B1 PE=1 SV=1[more]
ENPL_BOVIN1.630e-2955.08Endoplasmin OS=Bos taurus GN=HSP90B1 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-974 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-18_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504485 ID=CF504485; Name=CF504485; organism=Citrus sinensis; type=EST; length=351bp
TGAACAAGCAGAAACCCATTTGGATGAGGAAACCTGAGGAGATTACAAAA
GAAGAGTATGCTGCCTTCTACAAGAGTCTGACTAATGACCTGGGAGGAGC
ACCTTGGCCTGTGAAGCACTTCTCAGTTGAGGGCCAGCTTGAGTTTAAGG
CTATCCTCTTTGTTCCCAAGAGGGCACCTTTTGATCTCTTTGACACAAGG
AAGAAGCCCAATAATATCAAGCTCTACGTCCGCCGTGTCTTCATCATGGA
CAACTGTGAGGAGTTGATCCCCGAATACCTTGGTTTTGTTAAGGGTATTG
GTGATTCCGAGGATCTCCCTCTTAACATCTCAAGAGAAACACTCCAGCAG
A
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