CF504503

Overview
NameCF504503
Unique NameCF504503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CHICK (Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 SV=3)

HSP 1 Score: 219.55 bits (558), Expect = 5.680e-57
Identity = 100/148 (67.57%), Postives = 121/148 (81.76%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLT 444
            VM+ WLPA  ALL+M+  HLPSP TAQKYR E LYEGP DD+ A  I+NCDP G LM+Y+SKM+P SDKGRF+AFGRVFSG VSTGLKVRIMGPNY PG+K+DLY+K +QRT++ MG+  E +EDVPCGN V +VG+DQF+ K  T+T
Sbjct:  339 VMRRWLPAGDALLQMITIHLPSPVTAQKYRCELLYEGPPDDEAAIGIKNCDPRGSLMMYISKMVPTSDKGRFYAFGRVFSGLVSTGLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTIT 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 217.624 bits (553), Expect = 2.158e-56
Identity = 98/155 (63.23%), Postives = 125/155 (80.65%), Query Frame = 1
Query:    4 MQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH 468
            M+ WLPA   +L+M+ FHLPSP TAQKYR+E LYEGP DD+ A AI+ CDPNGPLM+Y+SKM+P SDKGRF+AFGRVFSGKV+TG+K RI GPNYVPG+K+DLY K++QRT++ MG+  E +ED+P GN   +VG+DQ++ K  T+T  K  DAH
Sbjct:  334 MRKWLPAGDTMLQMIAFHLPSPVTAQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVATGMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYK--DAH 486          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 216.853 bits (551), Expect = 3.682e-56
Identity = 99/156 (63.46%), Postives = 126/156 (80.77%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH 468
            VM+TWLPA  ALL+M+  HLPSP  AQKYR+E LYEGP DD+ A A+++CDP+GPLM+Y+SKM+P SDKGRF+AFGRVF+GKV+TG K RIMGPNY PG+K+DLY K++QRT++ MG+  E +EDVP GN   +VG+DQF+ K  T+T  K  DAH
Sbjct:  325 VMRTWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVATGQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--DAH 478          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_DICDI (Elongation factor 2 OS=Dictyostelium discoideum GN=efbA PE=1 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 6.280e-56
Identity = 98/151 (64.90%), Postives = 124/151 (82.12%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM+ +LPA+ A+L M++ HLPSP  AQKYR  NLYEGP+DD+ A AI+ CDPNGPLM+YVSKM+P SDKGRF+AFGRVFSG + TG KVRIMG NYVPG+K DL++KS+QRTV+ MG+K E +ED PCGN V +VG+DQF+ K+ T+T  +
Sbjct:  321 VMRKFLPAADAILSMIVTHLPSPLVAQKYRCANLYEGPMDDECAVAIQKCDPNGPLMMYVSKMVPTSDKGRFYAFGRVFSGIIRTGQKVRIMGVNYVPGKKDDLFLKSIQRTVLMMGRKTEQIEDCPCGNIVGLVGVDQFLVKSGTITTSE 471          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 214.157 bits (544), Expect = 2.386e-55
Identity = 98/151 (64.90%), Postives = 122/151 (80.79%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM+ +LPA+  LLEMMI HLPSP TAQ YR E LYEGP DD+ A AI+ CDP GPLMLYVSKM+P SDKGRF+AFGRVF+G V +GLKVRI GPNY PG+K+DL++K++QRTV+ MG K E ++D+P GN V +VG+DQF+ K+ TLT  +
Sbjct:  324 VMKAFLPAADCLLEMMILHLPSPVTAQAYRAETLYEGPQDDEAAMAIKTCDPKGPLMLYVSKMVPTSDKGRFYAFGRVFAGTVRSGLKVRIQGPNYTPGKKEDLFIKAIQRTVLMMGGKVEPIDDMPAGNIVGLVGIDQFLLKSGTLTTSE 474          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 4.071e-55
Identity = 95/151 (62.91%), Postives = 123/151 (81.46%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM+ +LPA+ AL+EM++ HLPSP TAQ+YR E LYEGP+DD+ A  IRNCD N PLM+YVSKM+P SD+GRF+AFGRVFSG V +GLKVRI GPNYVPG+K DL++K++QRTV+ MG + E +ED P GN + +VG+DQF+ K+ TLT  +
Sbjct:  323 VMRKFLPAADALMEMIVLHLPSPKTAQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRSGLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSE 473          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 2.020e-54
Identity = 96/151 (63.58%), Postives = 120/151 (79.47%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VMQ WL A   LLEM++ HLPSP+ AQKYRVENLYEGP DD+ A  IRNCDP+ PL ++VSKM+P SDKGRF+AFGRVFSG V+TG KVRI GP YVPG K+DL +K++QRTV+ MG+  E + DVP GNTV +VG+DQ++ K+ T+T  +
Sbjct:  313 VMQLWLSAGDTLLEMIVTHLPSPAAAQKYRVENLYEGPQDDETAKGIRNCDPDAPLCMFVSKMVPTSDKGRFYAFGRVFSGTVATGQKVRIQGPRYVPGGKEDLNIKNIQRTVLMMGRYVEQIPDVPAGNTVGLVGIDQYLLKSGTITTSE 463          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_PICGU (Elongation factor 2 OS=Pichia guilliermondii GN=EFT2 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.003e-53
Identity = 93/151 (61.59%), Postives = 119/151 (78.81%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DD++  AIRNCDP   LMLYVSKM+P SDKGRF+AFGRVF+G V  G K+RI GPNY PG+K+DL++KS+QRTV+ MG+  E ++D P GN V +VG+DQF+ K+ T+T  +
Sbjct:  323 VMRKFLPAADALLEMIVLHLPSPVTAQAYRAETLYEGPSDDEFCTAIRNCDPKADLMLYVSKMVPTSDKGRFYAFGRVFAGTVKAGQKIRIQGPNYTPGKKEDLFLKSIQRTVLMMGRNTEAIDDCPAGNIVGLVGVDQFLLKSGTITTNE 473          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 1.003e-53
Identity = 95/151 (62.91%), Postives = 119/151 (78.81%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM++WLPA  ALL+M+  HLPSP  AQKYR+E LYEGP DD+ A  I++CDP  PLM+YVSKM+P SDKGRF+AFGRVFSGKV TG K RIMGPN+ PG+K+DLY K++QRT++ MG+  E +EDVP GN   +VG+DQF+ K  T+T  K
Sbjct:  325 VMRSWLPAGEALLQMIAIHLPSPVVAQKYRMEMLYEGPHDDEAAIGIKSCDPEAPLMMYVSKMVPTSDKGRFYAFGRVFSGKVVTGQKARIMGPNFTPGKKEDLYEKTIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK 475          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 2.917e-53
Identity = 94/151 (62.25%), Postives = 120/151 (79.47%), Query Frame = 1
Query:    1 VMQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEK 453
            VM+ +LPA+ ALLEM++ HLPSP TAQ YR E LYEGP DDQ+   IR CDP   LM+Y+SKM+P SDKGRF+AFGRVFSG V +G KVRI GPNYVPG+K+DL++K+VQRTV+ MG+  E ++DVP GN + +VG+DQF+ K+ TLT  +
Sbjct:  323 VMRKFLPAADALLEMIVLHLPSPVTAQAYRAETLYEGPSDDQFCIGIRECDPKAELMVYISKMVPTSDKGRFYAFGRVFSGTVKSGQKVRIQGPNYVPGKKEDLFIKAVQRTVLMMGRTVEPIDDVPAGNILGIVGIDQFLLKSGTLTTNE 473          
The following BLAST results are available for this feature:
BLAST of CF504503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EF2_CHICK5.680e-5767.57Elongation factor 2 OS=Gallus gallus GN=EEF2 PE=1 ... [more]
EF2_CAEEL2.158e-5663.23Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_DROME3.682e-5663.46Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_DICDI6.280e-5664.90Elongation factor 2 OS=Dictyostelium discoideum GN... [more]
EF2_NEUCR2.386e-5564.90Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_SCHPO4.071e-5562.91Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_CRYPV2.020e-5463.58Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_PICGU1.003e-5361.59Elongation factor 2 OS=Pichia guilliermondii GN=EF... [more]
EF2_BOMMO1.003e-5362.91Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_PICPA2.917e-5362.25Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-992 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504503 ID=CF504503; Name=CF504503; organism=Citrus sinensis; type=EST; length=472bp
GTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATGAT
CTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAACT
TGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACTGT
GATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCATC
TGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGTGT
CAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTGAG
AAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATGGG
AAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTGGTAACACTGTGGCTA
TGGTTGGTCTCGATCAATTCATCACTAAAAATGCTACCTTGACTAATGAG
AAGGAAGTTGATGCCCATCCCA
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