CF504503

Overview
NameCF504503
Unique NameCF504503
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length472
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_SULIA (Elongation factor 2 OS=Sulfolobus islandicus (strain M.16.27) GN=fusA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.353e-16
Identity = 47/136 (34.56%), Postives = 78/136 (57.35%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTV---IWMGKKQETVEDVPCGNTVAMVGLDQ 417
            P + ALL+  I  +P+P  AQKYR+  +++G LD++ A A+ N DPNGP++  ++ M      G   A GRVFSG + +G ++ ++              K+ QR +   ++MG  +E  E++P GN  A++GLD+
Sbjct:  245 PINEALLDAAIKFVPNPIEAQKYRIPKIWKGDLDNELAKAMLNADPNGPIVFMITDMKVDPHAG-LVATGRVFSGTLRSGEELWLVN------------AKTSQRILQVSLYMGPTRELAEEIPAGNIAAVLGLDR 367          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METS5 (Elongation factor 2 OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=fusA PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 6.353e-16
Identity = 44/134 (32.84%), Postives = 79/134 (58.96%), Query Frame = 1
Query:   16 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQ 417
            +P + ALL+ +I  +P+P  AQKYR+  +++G LD++ A ++ N DPNGP+++ ++ M      G   A GRVFSG +  G +V ++              + V +  I+MG+ +E  +++P GN  A++GL++
Sbjct:  244 VPINEALLDAVIKFVPNPVDAQKYRIPKIWKGDLDNELAKSMLNADPNGPVVMMITDMKVDPHAG-LVATGRVFSGTIRPGSEVWLVNAK---------APQKVLQVSIYMGQFRELADEIPAGNIAAVLGLER 367          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.849e-15
Identity = 46/131 (35.11%), Postives = 71/131 (54.20%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411
            P    +L+M++ HLP P TAQ+YR+E ++ G  + +    +R CDPNG L + V+ +      G   A GRV+SG +  G +V      Y+   KK+     VQ+  I+MG  +   ++VP GN  A+ GL
Sbjct:  765 PVYQVVLDMVVKHLPDPVTAQEYRIEQIWPGDPESEDGKTLRKCDPNGKLAMVVTDVRIDEHAGE-VATGRVYSGTIREGQQV------YLASSKKE---TRVQQVGIYMGPDRIRTDEVPAGNIAAVTGL 885          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 2.414e-15
Identity = 50/146 (34.25%), Postives = 74/146 (50.68%), Query Frame = 1
Query:   34 LLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHP 471
            +L M+I HLP P TAQ YR++ +++G LD +   A+ NCD  GP+ + V+K+I     G   A GR+FSG V  G  +      Y+ G  K      VQ   + +G  +  V+++  GN  A+VGL   I      + E  V   P
Sbjct:  248 ILNMVIRHLPDPKTAQSYRIKQIWKGDLDSEIGKAMINCDYKGPVAMMVTKIIIDPHAGE-IAIGRLFSGTVKKGTDL------YISGAGKG----KVQTLAMMVGPDRIPVDEITAGNIAAIVGLKGAIAGATVSSLENMVPFEP 382          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 4.118e-15
Identity = 45/133 (33.83%), Postives = 75/133 (56.39%), Query Frame = 1
Query:   16 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLD 414
            +P   ALL+ +I  +P+P  +QKYR+  +++G LD + A A+ N DPNGP+++ ++ M      G   A GRVFSG +  G +V      ++   K+   +  V    ++MG  +E  E++P GN  A +G+D
Sbjct:  244 VPIHEALLDAVIKFVPNPRDSQKYRIPKIWKGDLDSEIAKAMINADPNGPIVMMINDMKVDPHAG-LVATGRVFSGTLRAGEEV------WLVNAKRQQRILQVS---LYMGAIRELAEEIPVGNIAAALGMD 366          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_NANEQ (Elongation factor 2 OS=Nanoarchaeum equitans GN=fusA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 7.025e-15
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411
            P    +L+M++ HLPSP  AQKYRV  L+ G L+ +Y  A+   DPNGP +  V+K+I      +  A  RV+SG +  G++V ++  N     KK      +Q+  ++ G ++  +E+   GN +A+ G+
Sbjct:  248 PLYRVVLDMVVRHLPSPKEAQKYRVPKLWHGDLNSKYGKAMLEADPNGPAVAVVTKVIVDKTSKQETAIARVWSGTIRRGMEVWLLNAN-----KK----VRLQQVGVFKGIQKIQIEEAKAGNIIAISGV 369          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METVS (Elongation factor 2 OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=fusA PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 1.198e-14
Identity = 45/131 (34.35%), Postives = 71/131 (54.20%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411
            P    +L+M I HLP+P  AQKYR+ N+++G  + +   ++  CDPNGPL   V+K+I     G   A  R+FSG++  G ++      Y+ G K+       Q+  I+MG ++  V  +  GN  A+ GL
Sbjct:  243 PLHEVILDMAIKHLPNPLQAQKYRIPNIWKGDAESEVGKSMAMCDPNGPLAGVVTKIIVDKHAGSISAC-RLFSGRIKQGDEL------YLVGSKQK---ARAQQVAIFMGAERVQVPSISAGNICALTGL 363          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_PICTO (Elongation factor 2 OS=Picrophilus torridus GN=fusA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.565e-14
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411
            P    +L+M+I +LP+P  AQKYR+  +++G LD +   A+ +CD NGP+ + V+K+I     G   A GR+FSG +  G ++      YV G  K      VQ   + +G  +  ++++  GN VA++GL
Sbjct:  243 PLHKVVLDMVIKNLPNPREAQKYRIPQIWKGDLDSEIGKAMLSCDDNGPVSMMVTKIIIDPHAGE-IAVGRLFSGIIRKGSEL------YVSGAGK----TKVQVLSMMVGPDRIPIDEIAAGNIVAIIGL 362          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.565e-14
Identity = 49/147 (33.33%), Postives = 77/147 (52.38%), Query Frame = 1
Query:   19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459
            P    +L+M I HLP+P TAQKYR+ N+++G  +     ++  CDPNGPL   V+K+I     G   A  R+FSG++  G  +      Y+ G K+       Q+  I+MG ++  V  +  GN  A+ GL +  T   T+ +  E+
Sbjct:  243 PLHEVVLDMSIKHLPNPLTAQKYRIPNIWKGDAESTIGKSMVACDPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDL------YLVGSKQK---ARAQQVSIFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEI 378          
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_AERPE (Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.565e-14
Identity = 45/152 (29.61%), Postives = 83/152 (54.61%), Query Frame = 1
Query:   16 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHP 471
            +P    LL+M+I  +P+P  AQ+YR+  +++G ++ +   A+ N DP+GPL+ +++ +    +K    A GRVFSG + +G +V ++      G+K  L   S     I+MG  +E  +++P GN  A++G +        ++   E +A P
Sbjct:  244 MPLHETLLDMVIKFVPNPREAQRYRIPKIWKGDINSEIGQAMLNADPDGPLVFFINDV--RIEKAGLVATGRVFSGTLRSGEEVYLLN----AGKKSRLLQVS-----IYMGPFREVTKEIPAGNIGAVMGFEDVRAGETVVSLGYEENAAP 384          
The following BLAST results are available for this feature:
BLAST of CF504503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
EF2_SULIA6.353e-1634.56Elongation factor 2 OS=Sulfolobus islandicus (stra... [more]
EF2_METS56.353e-1632.84Elongation factor 2 OS=Metallosphaera sedula (stra... [more]
EF2_METKA1.849e-1535.11Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]
EF2_THEAC2.414e-1534.25Elongation factor 2 OS=Thermoplasma acidophilum GN... [more]
EF2_SULAC4.118e-1533.83Elongation factor 2 OS=Sulfolobus acidocaldarius G... [more]
EF2_NANEQ7.025e-1533.59Elongation factor 2 OS=Nanoarchaeum equitans GN=fu... [more]
EF2_METVS1.198e-1434.35Elongation factor 2 OS=Methanococcus vannielii (st... [more]
EF2_PICTO1.565e-1434.35Elongation factor 2 OS=Picrophilus torridus GN=fus... [more]
EF2_METMP1.565e-1433.33Elongation factor 2 OS=Methanococcus maripaludis G... [more]
EF2_AERPE1.565e-1429.61Elongation factor 2 OS=Aeropyrum pernix GN=fusA PE... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-992 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_A10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504503 ID=CF504503; Name=CF504503; organism=Citrus sinensis; type=EST; length=472bp
GTCATGCAGACCTGGCTTCCTGCAAGTAGTGCACTTTTGGAAATGATGAT
CTTTCACCTTCCCTCTCCTTCCACGGCCCAAAAATATCGTGTTGAGAACT
TGTATGAGGGTCCTCTTGATGATCAATATGCTAATGCTATTCGGAACTGT
GATCCTAATGGTCCTCTTATGCTCTATGTATCTAAGATGATTCCTGCATC
TGATAAGGGTAGGTTCTTTGCTTTCGGTCGTGTGTTTTCTGGTAAGGTGT
CAACAGGTTTGAAGGTCAGGATCATGGGTCCAAACTATGTTCCTGGTGAG
AAGAAAGATTTGTATGTTAAGAGCGTCCAAAGGACTGTTATTTGGATGGG
AAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTGGTAACACTGTGGCTA
TGGTTGGTCTCGATCAATTCATCACTAAAAATGCTACCTTGACTAATGAG
AAGGAAGTTGATGCCCATCCCA
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