CF504503
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.669e-14 Identity = 45/126 (35.71%), Postives = 70/126 (55.56%), Query Frame = 1 Query: 34 LLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411 +L M+I HLP P TAQ YR++ +++G L+ + ++ +CD GP+ + V+K+I G A GR+FSG V G + Y+ G+ K VQ + +G + VE+V GN A+VGL Sbjct: 248 ILNMVIRHLPDPKTAQSYRIKQIWKGDLETEVGKSMVSCDFKGPVAMMVTKIIIDPHAGE-IAIGRLFSGTVKKGTDL------YISGDGKG----KVQTLAMMVGPDRIPVEEVTAGNIAAIVGL 362
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.669e-14 Identity = 48/147 (32.65%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459 P +L+M I HLP+P AQKYR+ N+++G + + ++ CDPNGPL V+K+I G A R+FSG++ G + Y+ G K+ Q+ I+MG ++ V + GN A+ GL + T T+ + E+ Sbjct: 243 PLHEVILDMAIKHLPNPLQAQKYRIPNIWKGDAESEIGKSMVACDPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDL------YLVGSKQK---ARAQQVSIFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEI 378
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 4.553e-14 Identity = 40/138 (28.99%), Postives = 72/138 (52.17%), Query Frame = 1 Query: 55 HLPSPSTAQKYRVENLYEGPLDDQYANAIRNC--DPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVD 462 H+PSP + Y GP++ AI + + PL+++V+K+ D F+AF RV+SG+V G KV+++G NY +++D+ V + + + + V+ G V + G+D I+K AT+ ++ D Sbjct: 448 HIPSPRENAARKASQSYIGPINSSIGKAILEMSREESAPLVMHVTKLYNTVDANNFYAFARVYSGQVKKGQKVKVLGENYSLEDEEDMVVAHIAEICVPCARYRLHVDGAVAGMLVLLGGVDNSISKTATIVSDNLKD 585
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METM6 (Elongation factor 2 OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=fusA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.947e-14 Identity = 48/147 (32.65%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459 P +L+M I HLP+P AQKYR+ N+++G + ++ CDPNGPL V+K+I G A R+FSG++ G + Y+ G K+ Q+ I+MG ++ V + GN A+ GL + T T+ + E+ Sbjct: 243 PLHEVILDMAITHLPNPLQAQKYRIPNIWKGDSESTIGKSMVACDPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDL------YLVGSKQK---ARAQQVSIFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEI 378
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METPE (Elongation factor 2 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=fusA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 7.767e-14 Identity = 47/147 (31.97%), Postives = 77/147 (52.38%), Query Frame = 1 Query: 19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459 P + LL+M++ HLP P AQK R+ ++ G + ++ DPNGP+ + V+ + G A GR+FSG + G ++ I+G + VQ+ I+MG + VE++P GN A+ GL I +T+TN +E+ Sbjct: 243 PLHAVLLDMVVKHLPDPFDAQKRRINVIWHGDKESVEGKSMLTADPNGPIAMMVTDISFDPHAGE-VATGRLFSGTLRRGTELYIIG--------SAMKANRVQQVGIFMGPTRVEVEELPAGNIAAVTGLKDAIV-GSTVTNLREM 379
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.730e-13 Identity = 47/131 (35.88%), Postives = 71/131 (54.20%), Query Frame = 1 Query: 19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGL 411 P A+ +M+I LPSP AQK R+ +++G + A+ CDPNGP+ V+K+ G A GR+FSG + G+++ I G VP + +Q+T I MG ++ VE +P GN A+ GL Sbjct: 243 PLYVAVNDMIIRFLPSPLEAQKNRIRVIWKGDWNSPVGKAMTACDPNGPVAFMVTKIKVDPHAGE-VATGRLFSGTLVRGMELHISG---VP------HTNRIQQTGIMMGAERIEVERIPAGNIAAVTGL 363
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.730e-13 Identity = 47/147 (31.97%), Postives = 76/147 (51.70%), Query Frame = 1 Query: 19 PASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459 P +L+M I HLP+P AQKYR+ N+++G + ++ C+PNGPL V+K+I G A R+FSG++ G + Y+ G K+ Q+ I+MG ++ V + GN A+ GL + T T+ + E+ Sbjct: 243 PLHEVVLDMSIKHLPNPLQAQKYRIPNIWKGDAESAIGKSMVECNPNGPLAGVVTKIIVDKHAGAISAC-RLFSGRIKQGDDL------YLVGSKQK---ARAQQVSIFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEI 378
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_STAMF (Elongation factor 2 OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=fusA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.951e-13 Identity = 41/138 (29.71%), Postives = 73/138 (52.90%), Query Frame = 1 Query: 4 MQTWLPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQ 417 +Q P A+L+M++ +P+P AQKYR+ ++ G L+ + A+ DPNGPL++ V+ + A GRVFSG + G +V ++ + V + ++MG +E +++ GN A++GLD+ Sbjct: 239 LQKLAPLHEAVLDMVVKFIPNPREAQKYRLPKIWHGDLNSEIGKAMLETDPNGPLVMLVND-VRIDPHAGLVATGRVFSGTLRAGEEVWLVNAR---------MKQKVLQVSLYMGPYRELADEIVAGNIAAVLGLDK 366
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METS3 (Elongation factor 2 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=fusA PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 6.575e-13 Identity = 42/148 (28.38%), Postives = 72/148 (48.65%), Query Frame = 1 Query: 16 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEV 459 +P S LL M++ HLPSP +Q+YRV N++EG ++ + P+GPL + V+ + G A GRV+ G + G +V ++G + VQ+ ++ G ++ + VP GN V + G I + E ++ Sbjct: 242 VPLSEVLLGMVVEHLPSPKVSQEYRVPNIWEGDIESPAGQGMITTSPDGPLAVMVTNVSVDKHAGE-IATGRVYGGSIEKGTEVYLVGSH---------SKSRVQQVGVYFGPERVNTDAVPAGNIVYVAGAKGAIAGETICSPEDKI 379
BLAST of CF504503 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 8.587e-13 Identity = 43/150 (28.67%), Postives = 73/150 (48.67%), Query Frame = 1 Query: 16 LPASSALLEMMIFHLPSPSTAQKYRVENLYEGPLDDQYANAIRNCDPNGPLMLYVSKMIPASDKGRFFAFGRVFSGKVSTGLKVRIMGPNYVPGEKKDLYVKSVQRTVIWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDA 465 +P LL M++ HLPSP+ +Q YRV ++ G L+ + A+ DP GPL + V+ + G A GRV+ G + G +V ++G + VQ+ ++MG ++ + VP GN VA+ G + +++ A Sbjct: 242 VPLHQVLLGMVVEHLPSPAESQAYRVPIIWSGDLESEEGQAMLKTDPEGPLAVMVTDVSIDKHAGE-VATGRVYGGAIEKGSEVFLVGSH---------SKARVQQVGVYMGPERVNTDKVPAGNIVAITGAKNAVAGETICDTGRKIKA 381 The following BLAST results are available for this feature:
BLAST of CF504503 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504503 ID=CF504503; Name=CF504503; organism=Citrus sinensis; type=EST; length=472bpback to top |