CF504505

Overview
NameCF504505
Unique NameCF504505
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length440
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_BRUME (Probable manganese transport protein mntH OS=Brucella melitensis GN=mntH PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.874e-17
Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTMA 435
            L ++L+++  A+++Q+L   L V TG                                + LA+ CR+ YP+   + LW+LAE+AI A D+ EVIGTA  LN+LF IP+ IGV+LT    L++L LQ  G R++E LI  L+  +A
Sbjct:   82 LSVVLLSNLMAVLLQALCTRLAVATG--------------------------------RDLAQACRDAYPRFLAWPLWLLAELAICATDLAEVIGTAIGLNLLFGIPLEIGVILTAVDVLLVLYLQNKGFRRVEALIITLLGVIA 194          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_ANASP (Probable manganese transport protein mntH OS=Anabaena sp. (strain PCC 7120) GN=mntH PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 7.874e-17
Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSL   LGV TG                                + LA+ CR+ +    +F LWVL EIAI ACD+ E++G+A AL +LF IP+  GV +T    L+LL LQ  G R  E L+  LV T+
Sbjct:   64 LTVILLSNLMAILLQSLCVRLGVATG--------------------------------RDLAQACRDYFSPKVSFCLWVLCEIAIAACDLAELLGSAIALQLLFVIPLIWGVCITALDVLVLLFLQHKGFRYTEALVIMLVATV 175          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LACCB (Probable manganese transport protein mntH OS=Lactobacillus casei (strain BL23) GN=mntH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.343e-16
Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL++S  A+++Q++AA LG+VTG                                + LA+  R+   K     LWV+ E+AI+A DI E+IG+A AL +LF +P+ +G+++T    LILL L + G RK+E ++A LV  +
Sbjct:   78 LSVILISSLIAMLLQAMAARLGIVTG--------------------------------RDLAQMTRDHTSKAMGGFLWVITELAIMATDIAEIIGSAIALKLLFNMPLIVGIIITTADVLILLLLMRLGFRKIEAVVATLVLVI 189          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LACC3 (Probable manganese transport protein mntH OS=Lactobacillus casei (strain ATCC 334) GN=mntH PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.343e-16
Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL++S  A+++Q++AA LG+VTG                                + LA+  R+   K     LWV+ E+AI+A DI E+IG+A AL +LF +P+ +G+++T    LILL L + G RK+E ++A LV  +
Sbjct:   78 LSVILISSLIAMLLQAMAARLGIVTG--------------------------------RDLAQMTRDHTSKAMGGFLWVITELAIMATDIAEIIGSAIALKLLFNMPLIVGIIITTADVLILLLLMRLGFRKIEAVVATLVLVI 189          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISW6 (Probable manganese transport protein mntH OS=Listeria welshimeri serovar 6b (strain ATCC 35897 / DSM 20650 / SLCC5334) GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISMO (Probable manganese transport protein mntH OS=Listeria monocytogenes GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISMH (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISMF (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4b (strain F2365) GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISMC (Probable manganese transport protein mntH OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
BLAST of CF504505 vs. ExPASy Swiss-Prot
Match: MNTH_LISIN (Probable manganese transport protein mntH OS=Listeria innocua GN=mntH PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 1.754e-16
Identity = 50/144 (34.72%), Postives = 78/144 (54.17%), Query Frame = 1
Query:    1 LWIILVASCAALIIQSLAANLGVVTGM*FVYQLHWLEIFFQYDQ*CISLYKFHFLLAGKHLAEHCRNEYPKVPNFILWVLAEIAIVACDIPEVIGTAFALNMLFKIPVWIGVLLTGFSTLILLALQQYGVRKLEFLIAFLVFTM 432
            L +IL+++  A+++QSLA+ LG+VTG                                + LA+   + + K   F+LW+LAE+AI+A DI EVIG+A ALN+LF IP+  GV +T     ++L LQ  G R +E ++  L+ T+
Sbjct:   76 LSVILISNILAVLLQSLASKLGIVTG--------------------------------RDLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITALDIFLVLFLQHKGFRYIEVIVITLMVTI 187          
The following BLAST results are available for this feature:
BLAST of CF504505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
MNTH_BRUME7.874e-1735.86Probable manganese transport protein mntH OS=Bruce... [more]
MNTH_ANASP7.874e-1736.11Probable manganese transport protein mntH OS=Anaba... [more]
MNTH_LACCB1.343e-1634.03Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_LACC31.343e-1634.03Probable manganese transport protein mntH OS=Lacto... [more]
MNTH_LISW61.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISMO1.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISMH1.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISMF1.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISMC1.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]
MNTH_LISIN1.754e-1634.72Probable manganese transport protein mntH OS=Liste... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_119000-994 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_A12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504505 ID=CF504505; Name=CF504505; organism=Citrus sinensis; type=EST; length=440bp
CTCTGGATCATTTTAGTGGCTTCATGTGCGGCTCTTATAATTCAGTCTCT
AGCAGCCAATCTCGGGGTTGTCACGGGTATGTGATTTGTATACCAGCTAC
ATTGGTTAGAAATCTTCTTTCAATATGATCAGTGATGCATCAGTTTATAC
AAATTCCATTTCTTGCTTGCAGGAAAGCATTTGGCAGAGCACTGTAGAAA
TGAATACCCTAAGGTGCCGAACTTCATATTATGGGTTCTTGCTGAAATTG
CTATAGTCGCGTGTGACATACCAGAAGTGATCGGAACAGCCTTCGCATTG
AATATGCTCTTCAAAATTCCAGTGTGGATTGGTGTTCTTCTAACTGGGTT
CAGTACTTTGATTCTTCTGGCTTTGCAGCAATATGGGGTTAGGAAGCTTG
AATTTTTGATTGCTTTTCTTGTATTTACCATGGCCCGGAT
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