CF504537

Overview
NameCF504537
Unique NameCF504537
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:876..1359. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 2.005e-36
Identity = 66/138 (47.83%), Postives = 98/138 (71.01%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+    S   F LD   L+    G+ER+K++F ALA + GF  ++  C   +++VME YK
Sbjct:  227 KGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.100e-34
Identity = 68/139 (48.92%), Postives = 94/139 (67.63%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEG-DAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            +GIN+D+PHVI +A  +PG+EHVGGDM+  +P G DAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T   +  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  230 RGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 4.182e-34
Identity = 65/138 (47.10%), Postives = 93/138 (67.39%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            KGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP   ++   ++  F +D I L   P GRER ++EF  LA  AGF G        N++ +EF K
Sbjct:  225 KGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 1.589e-33
Identity = 64/137 (46.72%), Postives = 91/137 (66.42%), Query Frame = 2
Query:    5 GINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T  ++  F +D I L   P G+ER ++EF  LA  AGF G        N++ +EF K
Sbjct:  228 GVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.640e-31
Identity = 65/138 (47.10%), Postives = 90/138 (65.22%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSYVMEFYK 415
            +GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V  +   S ++   D + +   P G+ERT  EF  LA  AGF    F       +VMEF+K
Sbjct:  241 RGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 9.640e-31
Identity = 65/139 (46.76%), Postives = 94/139 (67.63%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKGINFECNVCNSY-VMEFYK 415
            KGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E S+    LD +  I +  GRERT+K++  L+  +GF      C   NS  VMEFYK
Sbjct:  235 KGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITV-GGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFYK 372          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 2.805e-30
Identity = 57/106 (53.77%), Postives = 77/106 (72.64%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERT 319
            KGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD + +++    +D I L     G+ERT
Sbjct:  208 KGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.706e-19
Identity = 49/118 (41.53%), Postives = 75/118 (63.56%), Query Frame = 2
Query:   14 FDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFKG 364
            FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D  E S    ILD   L+    G+ERTK+ +  +   AGF G
Sbjct:  218 FDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESDH-ELSSTRLILDIDMLVN-TGGKERTKEVWEKIVKSAGFSG 333          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 6.481e-19
Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
BLAST of CF504537 vs. ExPASy Swiss-Prot
Match: 7OMT9_MEDSA (Isoflavone-7-O-methyltransferase 9 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.465e-19
Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 2
Query:    2 KGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTEASRDSFILDAIFLIQIPHGRERTKKEFTALAIEAGFK 361
            K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  + ++   ++D    +   +G+ER ++E+  L IEAGF+
Sbjct:  214 KCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVINEKKDENQVTQIKLLMDV--NMACLNGKERNEEEWKKLFIEAGFQ 334          
The following BLAST results are available for this feature:
BLAST of CF504537 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 39
Match NameE-valueIdentityDescription
IMT1_MESCR2.005e-3647.83Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
OMT1_ORYSJ1.100e-3448.92Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_SACOF4.182e-3447.10Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
COMT1_MAIZE1.589e-3346.72Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
SMT_COPJA9.640e-3147.10(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA9.640e-3146.76Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
COMT1_EUCGL2.805e-3053.77Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
4OMT_COPJA1.706e-1941.533'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
7OMT6_MEDSA6.481e-1937.40Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]
7OMT9_MEDSA8.465e-1937.40Isoflavone-7-O-methyltransferase 9 OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-026 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_D10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504537 ID=CF504537; Name=CF504537; organism=Citrus sinensis; type=EST; length=484bp
TAAGGGTATTAATTTTGACGTACCTCATGTTATAAAAGATGCCTCATCTT
ATCCCGGCATGGAACATGTTGGCGGAGATATGTACCAAAAAATTCCAGAG
GGGGATGCCATTTTAATGAAGTGGATGCTTCATAATTTTGATGATGAGAA
TTGCATAAAGATACTGAGGAATTGTTACAAAGCTCTTCCAAATGATGGAA
AGGTACTTGTTATTAACTCAACGTTGCCAGAAGTGCCTGACAGTACCGAG
GCTTCAAGGGATTCCTTCATTTTAGATGCAATTTTTTTAATCCAAATTCC
TCATGGAAGGGAGCGGACCAAAAAGGAGTTCACTGCATTGGCAATCGAAG
CTGGATTTAAGGGTATCAACTTTGAATGTAACGTTTGCAATTCCTATGTC
ATGGAATTCTACAAGTAACTTTGAAGCTAGATTGCTTCATTCTTTCTTTA
TCAGAAAGATGCATCTTCTCAATTTTAATTTGGA
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