CF504548

Overview
NameCF504548
Unique NameCF504548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PERA2_ARMRU (Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 3.293e-27
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   88 LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L+  +Y   CP A   ++  ++ A + + R+GASL+RLHFHDCFV GCDASILLDD+ +I SEKNA PN NS RGF V+D IK  ++  C   VVSC+DILA+A
Sbjct:    2 LNATFYSGTCPNASAIVRSTIQQAFQSDTRIGASLIRLHFHDCFVDGCDASILLDDSGSIQSEKNAGPNANSARGFNVVDNIKTALENTCP-GVVSCSDILALA 104          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 3.293e-27
Identity = 57/104 (54.81%), Postives = 74/104 (71.15%), Query Frame = 1
Query:   88 LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L P YY   CP+    ++ +V  AV +E RM ASLLRLHFHDCFVQGCD S+LLD +  + +EKN+ PN+ S RGF+V+DQIK E++K C    VSCAD+L +A
Sbjct:   30 LFPGYYAHSCPQVNEIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSKSARGFDVVDQIKAELEKQCP-GTVSCADVLTLA 132          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER66_MAIZE (Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 4.301e-27
Identity = 65/118 (55.08%), Postives = 87/118 (73.73%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPN-NNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            V+++A A+ A + LS  +YD+ CP AL TI+  V +AV +E R+GASLLRLHFHDCFV+GCDAS+LL+DTS    E++  PN   + RGF V++ IK +V+ VC   +VSCADILAVA
Sbjct:   18 VVLVALASAASAQLSSTFYDRSCPNALSTIRSGVNSAVRQEPRVGASLLRLHFHDCFVRGCDASLLLNDTS---GEQSQGPNLTLNPRGFVVVNSIKAQVESVCP-GIVSCADILAVA 131          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 5.618e-27
Identity = 61/126 (48.41%), Postives = 83/126 (65.87%), Query Frame = 1
Query:   40 FHVVLILAFAATAFST-----LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDT-STIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            F  +L +A A   FS+     LS  +Y   CP     ++ +V+ A++ + R+G SL+RLHFHDCFV GCD S+LLD+  +TI SEK+A+PN NS RGF+V+D IK  V+  C   VVSC DILA+A
Sbjct:    4 FSPLLAMALAIFIFSSHSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACP-GVVSCVDILALA 128          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 1.251e-26
Identity = 67/127 (52.76%), Postives = 81/127 (63.78%), Query Frame = 1
Query:   19 VMAYRGIFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            VM    +  V  +    +   + LSP  Y K CP  L  ++  V+ A++ E RM ASL+RLHFHDCFV GCDAS+LLD T   +SEK AIPN NSVRGFEVID IK  V+  C   VVSCADIL +A
Sbjct:    7 VMGGHVLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGT---NSEKLAIPNVNSVRGFEVIDTIKAAVENACP-GVVSCADILTLA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 118.242 bits (295), Expect = 1.251e-26
Identity = 60/99 (60.61%), Postives = 70/99 (70.71%), Query Frame = 1
Query:  103 YDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            Y   CPEA   +   VE  V ++ RM ASLLRLHFHDCFV GCDAS+LLDDT  +  EK A PN NS+RGFEVID IK +++ VC    VSCADILA+A
Sbjct:   55 YRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPE-TVSCADILAMA 152          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 117.857 bits (294), Expect = 1.634e-26
Identity = 55/115 (47.83%), Postives = 78/115 (67.83%), Query Frame = 1
Query:   55 ILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +L  ++ + + L+P +YD  CP     ++  +   +  + R+ AS+LRLHFHDCFV GCDASILLD+T++  +EK+A PN NS RGF VID++K  V+  C R  VSCADIL +A
Sbjct:   20 LLLHSSISSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPR-TVSCADILTIA 133          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.788e-26
Identity = 63/139 (45.32%), Postives = 83/139 (59.71%), Query Frame = 1
Query:   22 MAYRGIFHVVLILAFAATAF-------------STLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            MA  G F ++L L +A T                 L P +Y   CP A   ++ +V  AV +E RM ASL+RLHFHDCFVQGCD S+LLD + +I +EKN+ PN+ S RGFEV+D+IK  ++  C    VSCAD L +A
Sbjct:    1 MARIGSFLIILYLIYALTLCICDDDESNYGGDKGNLFPGFYRSSCPRAEEIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPN-TVSCADALTLA 138          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.641e-26
Identity = 67/128 (52.34%), Postives = 81/128 (63.28%), Query Frame = 1
Query:   16 LVMAYRGIFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            + M       +V+++A A  A   LS  +YD  CP AL  IK  V AAV  + RMGASLLRLHFHDCF  GCDAS+LL        E+NA PN  S+RGF VID IK +++ VCK+  VSCADIL VA
Sbjct:    1 MAMGSASCISLVVLVALATAASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLL-----TGMEQNAGPNVGSLRGFGVIDNIKTQLESVCKQ-TVSCADILTVA 120          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.641e-26
Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 1
Query:   22 MAYRGIFHVVLILAFAATAF------------STLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            MA  G F ++L L +A T                L P +Y   CP A   ++ +V  A E+E RM ASL+RLHFHDCFVQGCD S+LLD + +I +EKN+ PN+ S RGFEV+D+IK  ++  C    VSCAD L +A
Sbjct:    1 MARIGSFLILLSLTYALTLCICDNASNFGGNKRNLFPDFYRSSCPRAEEIVRSVVAKAFERETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSRSARGFEVVDEIKAALENECPN-TVSCADALTLA 137          
The following BLAST results are available for this feature:
BLAST of CF504548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PERA2_ARMRU3.293e-2754.81Peroxidase A2 OS=Armoracia rusticana GN=HRPA2 PE=1... [more]
PER49_ARATH3.293e-2754.81Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER66_MAIZE4.301e-2755.08Peroxidase 66 OS=Zea mays GN=PER66 PE=1 SV=1[more]
PER15_IPOBA5.618e-2748.41Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PERN_ARMRU1.251e-2652.76Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER40_ARATH1.251e-2660.61Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER32_ARATH1.634e-2647.83Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER15_ARATH2.788e-2645.32Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER1_WHEAT3.641e-2652.34Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER14_ARATH3.641e-2645.65Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-037 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504548 ID=CF504548; Name=CF504548; organism=Citrus sinensis; type=EST; length=399bp
ACTAATTAGTGCAAATTAGTCATGGCTTATAGAGGCATATTTCATGTCGT
TCTCATTTTGGCTTTTGCAGCTACAGCTTTCTCAACCCTTTCTCCTTGCT
ACTATGATAAAGTTTGTCCCGAAGCTTTGCCAACAATCAAACGAATAGTT
GAAGCCGCTGTGGAAAAAGAAGGCCGCATGGGTGCTTCCTTACTTCGTCT
CCACTTCCATGATTGTTTTGTTCAAGGTTGTGATGCCTCCATTCTTCTTG
ATGACACGTCCACCATTGATAGTGAAAAGAATGCAATTCCAAATAATAAT
TCCGTTAGAGGATTCGAGGTCATCGACCAGATAAAGAAAGAGGTCGACAA
AGTTTGCAAACGCCCAGTTGTTTCTTGTGCAGATATCTTGGCTGTAGCA
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