CF504548

Overview
NameCF504548
Unique NameCF504548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PERA_IPOBA (Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.427e-23
Identity = 53/98 (54.08%), Postives = 66/98 (67.35%), Query Frame = 1
Query:  106 DKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            D+ C      +K +V AA+  E RMGASL+RL FHDCFV GCDA +LL+DT+T   E+ A  NNNSVRGF VI+Q K+ V        VSCADIL++A
Sbjct:   67 DEAC--VFSAVKEVVVAAINAEARMGASLIRLFFHDCFVDGCDAGLLLNDTATFTGEQTAAGNNNSVRGFAVIEQAKQNVKTQMPDMSVSCADILSIA 162          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_MAIZE (Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.096e-22
Identity = 56/117 (47.86%), Postives = 76/117 (64.96%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLD-DTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L L   ATA + L   +YD  CP A   +++ V AA  K+  + A L+RLHFHDCFV+GCD S+LL  +     +E++A+PNN S+RGF+VID  K  V++ C R  VSCADI+A A
Sbjct:   23 LCLLLPATARAQLRVGFYDTSCPNAEALVRQAVAAAFAKDAGIAAGLIRLHFHDCFVRGCDGSVLLTVNPGGGQTERDALPNNPSLRGFDVIDAAKTAVEQSCPR-TVSCADIVAFA 138          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER2_CUCSA (Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.190e-22
Identity = 49/100 (49.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +YD+ CP+    ++R+V+ A+  + R GA L+RLHFHDCFV GCD S+LL+D   + SE  A P N ++ GF +++ IK  V+K C   VVSCADILA+A
Sbjct:    2 FYDESCPDVSNIVRRVVQQALVSDERAGARLIRLHFHDCFVNGCDGSVLLEDQPGVVSEL-AAPGNANITGFNIVNNIKAAVEKACP-GVVSCADILAIA 99          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER58_ARATH (Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.068e-21
Identity = 52/117 (44.44%), Postives = 70/117 (59.83%), Query Frame = 1
Query:   55 ILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLD--DTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            IL F   + + L+  +Y   CP      + ++E A   + R+ A ++RLHFHDCFV GCD S+LLD      ++ EK A  N  S+ GFEVID IK  ++ VC   VVSCADILA+A
Sbjct:   14 ILMFGVLSNAQLTSDFYSTTCPNVTAIARGLIERASRNDVRLTAKVMRLHFHDCFVNGCDGSVLLDAAPADGVEGEKEAFQNAGSLDGFEVIDDIKTALENVCP-GVVSCADILAIA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER2_MAIZE (Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.068e-21
Identity = 58/121 (47.93%), Postives = 77/121 (63.64%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPC---YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTS-TIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +L+LA AA   S   P    YY   CP+A   +K  +E A+ +    GA+++R+ FHDCFV+GCDAS+LLD T  +   EK A PNN S+RGFE+ID IK  ++  C   VVSCADI+A A
Sbjct:   19 LLLLAAAACQASPYYPLELGYYRYTCPQAEAIVKASMEKAIAQNPGNGAAVIRMLFHDCFVEGCDASVLLDPTPFSPTPEKLAAPNNPSLRGFELIDAIKDALEAACP-GVVSCADIIAFA 138          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.527e-21
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 1
Query:   37 IFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +F +++ + +  +  + LS  +YD  CP AL TI+  + ++V    R  A ++RL FHDCFVQGCDAS+LL    +    + A P N+ V G+EVID  K  V++VC   VVSCADILAVA
Sbjct:   15 LFMLLISVNYFMSCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGS----ERASPANDGVLGYEVIDAAKAAVERVCP-GVVSCADILAVA 130          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.527e-21
Identity = 55/121 (45.45%), Postives = 79/121 (65.29%), Query Frame = 1
Query:   40 FHVVLILAFA-ATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            F V+L+L F    A + L   +Y + CP A   ++ +V     ++  + A+L R+HFHDCFVQGCDAS+L+D T++  SEKNA P N SVRGFE+ID+IK  ++  C    VSC+DI+ +A
Sbjct:    6 FSVLLLLLFIFPVALAQLKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAGP-NFSVRGFELIDEIKTALEAQCP-STVSCSDIVTLA 124          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.527e-21
Identity = 54/121 (44.63%), Postives = 76/121 (62.81%), Query Frame = 1
Query:   37 IFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +F +++ + +  +  + LS  +YD  CP AL TI+  + ++V    R  A ++RL FHDCFVQGCDAS+LL    +    + A P N+ V G+EVID  K  V++VC   VVSCADILAVA
Sbjct:   15 LFMLLISVNYFMSCNAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGAGS----ERASPANDGVLGYEVIDAAKAAVERVCP-GVVSCADILAVA 130          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PERX_TOBAC (Lignin-forming anionic peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.606e-21
Identity = 50/118 (42.37%), Postives = 73/118 (61.86%), Query Frame = 1
Query:   46 VVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            ++ ++A    + + LS  +YD  CP     ++ +++     + R GA ++RLHFHDCFV GCD SILLD   T  +EK+A P N    GF+++D IK  ++ VC   VVSCADILA+A
Sbjct:   10 ILFLVAIFGASNAQLSATFYDTTCPNVTSIVRGVMDQRQRTDARAGAKIIRLHFHDCFVNGCDGSILLDTDGT-QTEKDA-PANVGAGGFDIVDDIKTALENVCP-GVVSCADILALA 124          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.016e-21
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAV 396
            L+L FA      L   +Y K CP+    +K++V  A+ K   +GA LLR+ FHDCFV+GCD S+LLD  +    EK+A+P N S+RGF +ID  K  ++KVC   +VSC+DILA+
Sbjct:   14 LVLLFAQANSQGLKVGFYSKTCPQLEGIVKKVVFDAMNKAPTLGAPLLRMFFHDCFVRGCDGSVLLDKPNN-QGEKSAVP-NLSLRGFGIIDDSKAALEKVCP-GIVSCSDILAL 125          
The following BLAST results are available for this feature:
BLAST of CF504548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PERA_IPOBA6.427e-2354.08Anionic peroxidase OS=Ipomoea batatas PE=1 SV=1[more]
PER1_MAIZE1.096e-2247.86Peroxidase 1 OS=Zea mays GN=PER1 PE=1 SV=1[more]
PER2_CUCSA3.190e-2249.00Peroxidase 2 (Fragment) OS=Cucumis sativus PE=2 SV... [more]
PER58_ARATH2.068e-2144.44Peroxidase 58 OS=Arabidopsis thaliana GN=PER58 PE=... [more]
PER2_MAIZE2.068e-2147.93Peroxidase 2 OS=Zea mays GN=PER2 PE=2 SV=1[more]
PER2_ZINEL3.527e-2144.63Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER28_ARATH3.527e-2145.45Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER1_ZINEL3.527e-2144.63Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PERX_TOBAC4.606e-2142.37Lignin-forming anionic peroxidase OS=Nicotiana tab... [more]
PER27_ARATH6.016e-2146.09Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-037 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504548 ID=CF504548; Name=CF504548; organism=Citrus sinensis; type=EST; length=399bp
ACTAATTAGTGCAAATTAGTCATGGCTTATAGAGGCATATTTCATGTCGT
TCTCATTTTGGCTTTTGCAGCTACAGCTTTCTCAACCCTTTCTCCTTGCT
ACTATGATAAAGTTTGTCCCGAAGCTTTGCCAACAATCAAACGAATAGTT
GAAGCCGCTGTGGAAAAAGAAGGCCGCATGGGTGCTTCCTTACTTCGTCT
CCACTTCCATGATTGTTTTGTTCAAGGTTGTGATGCCTCCATTCTTCTTG
ATGACACGTCCACCATTGATAGTGAAAAGAATGCAATTCCAAATAATAAT
TCCGTTAGAGGATTCGAGGTCATCGACCAGATAAAGAAAGAGGTCGACAA
AGTTTGCAAACGCCCAGTTGTTTCTTGTGCAGATATCTTGGCTGTAGCA
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