CF504548

Overview
NameCF504548
Unique NameCF504548
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length399
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER35_ARATH (Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.099e-14
Identity = 47/120 (39.17%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVR--GFEVIDQIKKEVD-KVCKRPVVSCADILAVA 399
            ++I  F  T  + LS  +Y K CP     ++  V+  ++K      + LRL FHDCFV GCDAS+++  T    +EK+  P+N S+   GF+V+ Q KK +D     R  VSCADIL +A
Sbjct:   14 LIISVFPDTTTAQLSRGFYSKTCPNVEQIVRNAVQKKIKKTFVAVPATLRLFFHDCFVNGCDASVMIQSTPKNKAEKDH-PDNISLAGDGFDVVIQAKKALDSNPSCRNKVSCADILTLA 132          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.176e-14
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +L+L   +++ + LS  +Y   CP A   ++  V +A   +  +   LLRL FHDCFVQGCD S+L+    T  S+    P N S+ GF VI+ +K  ++  C    VSCADIL +A
Sbjct:   18 LLLLLLLSSSVAELSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLIRGNGTERSD----PGNASLGGFAVIESVKNILEIFCP-GTVSCADILVLA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER55_ARATH (Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.707e-13
Identity = 43/118 (36.44%), Postives = 67/118 (56.78%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNN-SVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +L+ +  A + + LS  YY   CP     +K+ V    ++      + LR+ FHDCFV+GCDAS+ +   +  D+EK+A  N + +  GF+ + + K  V+  C   VVSCADILA+A
Sbjct:   19 MLLFSMVAESNAQLSENYYASTCPSVELIVKQAVTTKFKQTVTTAPATLRMFFHDCFVEGCDASVFIASENE-DAEKDADDNKSLAGDGFDTVIKAKTAVESQCP-GVVSCADILALA 134          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.617e-13
Identity = 44/120 (36.67%), Postives = 68/120 (56.67%), Query Frame = 1
Query:   49 VLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVR--GFEVIDQIKKEVDKVCK-RPVVSCADILAVA 399
            +L++ F+++ F+ L   +Y K CP     ++  V    ++      + LRL FHDCFV+GCDASILL   S  D      P++ S+   GF+ + + K+ +D+    R  VSCADILA+A
Sbjct:   12 LLLIFFSSSVFAQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPSEKDH-----PDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALA 126          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER31_ARATH (Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.875e-13
Identity = 42/117 (35.90%), Postives = 65/117 (55.56%), Query Frame = 1
Query:   52 LILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPN-NNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            L+  F  TA S L+  +Y K CP  L  I+  +           A+++RL FHDCF  GCDAS+L+  T+   +E+++  N +    GF+VI + K  ++  C    VSC+DI++VA
Sbjct:    9 LLFLFFFTAQSRLTTNFYSKTCPRFLDIIRDTITNKQITNPTTAAAVIRLFFHDCFPNGCDASVLISSTAFNTAERDSSINLSLPGDGFDVIVRAKTALELACPN-TVSCSDIISVA 124          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER6_ARATH (Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.029e-12
Identity = 47/108 (43.52%), Postives = 59/108 (54.63%), Query Frame = 1
Query:   82 STLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRG--FEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            + LS  YY K CPE   T+ +IV              LRL FHDC V GCDASIL+  T    SE++A   N S+ G  F+VI +IK  V+  C   +VSC+DIL  A
Sbjct:   20 ANLSSDYYTKTCPEFEETLVQIVTDKQIAAPTTAVGTLRLFFHDCMVDGCDASILVASTPRKTSERDA-DINRSLPGDAFDVITRIKTAVELKCPN-IVSCSDILVGA 125          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER65_ARATH (Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.343e-12
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 1
Query:   37 IFHVVLILAFAATAFSTLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRG--FEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            +F + ++    +   + L   YY K CP+    ++  V     ++    A  LRL FHDCF++GCDAS+L+   S   +E++    N+S+ G  F+++ +IK  ++  C   VVSCADILA A
Sbjct:   16 LFCLAVVAPIISADVAILRTDYYQKTCPDFHKIVREAVTTKQVQQPTTAAGTLRLFFHDCFLEGCDASVLIATNSFNKAERDD-DLNDSLPGDAFDIVTRIKTALELSCP-GVVSCADILAQA 136          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.343e-12
Identity = 44/122 (36.07%), Postives = 68/122 (55.74%), Query Frame = 1
Query:   52 LILAFAATAFST----LSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRG--FEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            ++L F  + +S     L+  YY K CP+    ++  V     ++    A  LRL FHDCF++GCDAS+L+   S   +E++    N S+ G  F+++ +IK  ++  C   VVSCADILA A
Sbjct:   10 VVLVFVPSIYSAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIATNSFNKAERDD-DLNESLPGDAFDIVTRIKTALELSCP-GVVSCADILAQA 129          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.343e-12
Identity = 39/100 (39.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:  100 YYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPNNNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            YY + CP+A   I++ VE    K G    S LR  FHDC V+ CDAS+LL+    ++SE+ +   +  +R F+ +  IK  ++K C    VSCADI+A++
Sbjct:   34 YYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQKS-KRSFGMRNFKYVKIIKDALEKECP-STVSCADIVALS 131          
BLAST of CF504548 vs. ExPASy Swiss-Prot
Match: PER63_ARATH (Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.291e-12
Identity = 44/125 (35.20%), Postives = 70/125 (56.00%), Query Frame = 1
Query:   37 IFHVVLILAFAATAF---STLSPCYYDKVCPEALPTIKRIVEAAVEKEGRMGASLLRLHFHDCFVQGCDASILLDDTSTIDSEKNAIPN-NNSVRGFEVIDQIKKEVDKVCKRPVVSCADILAVA 399
            I  ++L L+F + +F   S L+  +Y K CP+ L  I+  +           A+ LRL FHDCF  GCDAS+L+  T+   +E+++  N +    GF+V+ + K  ++  C    VSC+DI+AVA
Sbjct:   12 IILLLLCLSFQSLSFAAESHLTVDFYSKSCPKFLDIIRETITNKQISTPTTAAAALRLFFHDCFPNGCDASVLVSSTAFNTAERDSSINLSLPGDGFDVVIRAKTALELACPN-TVSCSDIIAVA 135          
The following BLAST results are available for this feature:
BLAST of CF504548 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 105
Match NameE-valueIdentityDescription
PER35_ARATH1.099e-1439.17Peroxidase 35 OS=Arabidopsis thaliana GN=PER35 PE=... [more]
PER18_ARATH4.176e-1438.46Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER55_ARATH2.707e-1336.44Peroxidase 55 OS=Arabidopsis thaliana GN=PER55 PE=... [more]
PER16_ARATH4.617e-1336.67Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER31_ARATH7.875e-1335.90Peroxidase 31 OS=Arabidopsis thaliana GN=PER31 PE=... [more]
PER6_ARATH1.029e-1243.52Peroxidase 6 OS=Arabidopsis thaliana GN=PER6 PE=2 ... [more]
PER65_ARATH1.343e-1234.15Peroxidase 65 OS=Arabidopsis thaliana GN=PER65 PE=... [more]
PER41_ARATH1.343e-1236.07Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER21_ARATH1.343e-1239.00Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER63_ARATH2.291e-1235.20Peroxidase 63 OS=Arabidopsis thaliana GN=PER63 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-037 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_E11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504548 ID=CF504548; Name=CF504548; organism=Citrus sinensis; type=EST; length=399bp
ACTAATTAGTGCAAATTAGTCATGGCTTATAGAGGCATATTTCATGTCGT
TCTCATTTTGGCTTTTGCAGCTACAGCTTTCTCAACCCTTTCTCCTTGCT
ACTATGATAAAGTTTGTCCCGAAGCTTTGCCAACAATCAAACGAATAGTT
GAAGCCGCTGTGGAAAAAGAAGGCCGCATGGGTGCTTCCTTACTTCGTCT
CCACTTCCATGATTGTTTTGTTCAAGGTTGTGATGCCTCCATTCTTCTTG
ATGACACGTCCACCATTGATAGTGAAAAGAATGCAATTCCAAATAATAAT
TCCGTTAGAGGATTCGAGGTCATCGACCAGATAAAGAAAGAGGTCGACAA
AGTTTGCAAACGCCCAGTTGTTTCTTGTGCAGATATCTTGGCTGTAGCA
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