CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: P5CS_PONAB (Delta-1-pyrroline-5-carboxylate synthetase OS=Pongo abelii GN=ALDH18A1 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.227e-21
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 295
            A  ++ +G++L+RT +A  L LE+ + P+GVLL++FESRPD L Q+A+LAI SGNGLLLKGGKEA  SN ILH +   A+     ++ + LV +REE+
Sbjct:  445 ASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEV 542          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: P5CS_HUMAN (Delta-1-pyrroline-5-carboxylate synthetase OS=Homo sapiens GN=ALDH18A1 PE=1 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 1.227e-21
Identity = 50/98 (51.02%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 295
            A  ++ +G++L+RT +A  L LE+ + P+GVLL++FESRPD L Q+A+LAI SGNGLLLKGGKEA  SN ILH +   A+     ++ + LV +REE+
Sbjct:  445 ASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESRPDCLPQVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEV 542          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ACAM1 (Gamma-glutamyl phosphate reductase OS=Acaryochloris marina (strain MBIC 11017) GN=proA PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.038e-20
Identity = 49/98 (50.00%), Postives = 72/98 (73.47%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            A +E+P+G +  + EL   L+L + SCPLGVL ++FE+RPDA++QIA+LA++SGNG+LLKGG+EA+ S   L K I   + +T V   ++ L+TSREE
Sbjct:   90 ATLEDPVGTVQLKRELDTDLVLSRVSCPLGVLGVIFEARPDAVMQIAALAMKSGNGVLLKGGQEALHSCQALVKAIHQGLSNTAVSPNVVALLTSREE 187          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_MICAN (Gamma-glutamyl phosphate reductase OS=Microcystis aeruginosa (strain NIES-843) GN=proA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.021e-20
Identity = 51/99 (51.52%), Postives = 70/99 (70.71%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEI 295
            A + +P+  +    EL  GLIL + +CPLGVL ++FE+RPDAL+QI SLAI+SGNG++LKGGKEA+RS   L  +I  A+  T V    + L+T+REEI
Sbjct:   90 AKLADPLATMQINRELDQGLILRRITCPLGVLGVIFEARPDALIQITSLAIKSGNGVILKGGKEAIRSCQALVTIIHQALSQTKVNPAAVRLLTTREEI 188          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOTH (Gamma-glutamyl phosphate reductase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=proA PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.148e-19
Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREEI 295
            +E+P+G+ L  TEL +GL L + +CP+GV+ I+FESRPDALVQI++L ++SGNG+LLKGG EA  +N IL ++IT A  +  +    I L+ +R ++
Sbjct:   87 LEDPVGKTLLSTELDEGLELYRVTCPIGVVGIIFESRPDALVQISTLCLKSGNGVLLKGGSEARETNKILAQIITEATEEVGIPPNWIKLLETRADV 183          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PELTS (Gamma-glutamyl phosphate reductase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=proA PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 1.499e-19
Identity = 43/78 (55.13%), Postives = 61/78 (78.21%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSA 238
            ++E+P+G+ L  TEL DGL L K +CP+GV+ ++FESRPDALVQI++L ++SGNG+LLKGG EA  +N +L  +I  A
Sbjct:   86 ELEDPVGRTLLSTELDDGLELYKVTCPIGVIGVIFESRPDALVQISTLCLKSGNGVLLKGGSEARETNRVLAAIIAGA 163          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SYNP6 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.558e-19
Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREE 292
            A + +P+GQI    EL +GLIL++ +CP+GVL ++FE+RPDA++QIASLAI+SGNG +LKGG+EA+ S  AI+  +  +        + I L+TSREE
Sbjct:   90 AQLPDPLGQIQIDRELDEGLILQRLTCPVGVLGVIFEARPDAVIQIASLAIKSGNGAILKGGREAICSCQAIVAAIAQALAEQQAPVEAIRLLTSREE 187          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SYNE7 (Gamma-glutamyl phosphate reductase OS=Synechococcus elongatus (strain PCC 7942) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.558e-19
Identity = 49/98 (50.00%), Postives = 71/98 (72.45%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREE 292
            A + +P+GQI    EL +GLIL++ +CP+GVL ++FE+RPDA++QIASLAI+SGNG +LKGG+EA+ S  AI+  +  +        + I L+TSREE
Sbjct:   90 AQLPDPLGQIQIDRELDEGLILQRLTCPVGVLGVIFEARPDAVIQIASLAIKSGNGAILKGGREAICSCQAIVAAIAQALAEQQAPVEAIRLLTSREE 187          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_NATPD (Gamma-glutamyl phosphate reductase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=proA PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 2.558e-19
Identity = 49/98 (50.00%), Postives = 69/98 (70.41%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 295
            A  E+P+G+ L   EL DGL L K S P+GV+  VFESRPDALVQIA+L++RSGN ++LKGG EA  SN +L+++I  A  D + +    L+ +RE++
Sbjct:   91 AGQEDPLGKTLTARELDDGLDLYKVSVPIGVIGTVFESRPDALVQIAALSLRSGNAVILKGGSEASHSNRVLYEIIREATAD-LPDGWAQLIEAREDV 187          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_NOSP7 (Gamma-glutamyl phosphate reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=proA PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 3.340e-19
Identity = 48/96 (50.00%), Postives = 70/96 (72.92%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            +++P+G++    EL  GLIL++ +CPLGVL I+FE+RP+A +QIASLAI+SGNG++LK GKEA+RS   + K I   +  T V    + L+T+REE
Sbjct:   94 LDDPVGKVQIHRELDTGLILKRITCPLGVLGIIFEARPEAAIQIASLAIKSGNGVILKCGKEAVRSCEAIVKAIKQGLSHTAVNPDTVQLLTTREE 189          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
P5CS_PONAB1.227e-2151.02Delta-1-pyrroline-5-carboxylate synthetase OS=Pong... [more]
P5CS_HUMAN1.227e-2151.02Delta-1-pyrroline-5-carboxylate synthetase OS=Homo... [more]
PROA_ACAM11.038e-2050.00Gamma-glutamyl phosphate reductase OS=Acaryochlori... [more]
PROA_MICAN3.021e-2051.52Gamma-glutamyl phosphate reductase OS=Microcystis ... [more]
PROA_CLOTH1.148e-1948.45Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_PELTS1.499e-1955.13Gamma-glutamyl phosphate reductase OS=Pelotomaculu... [more]
PROA_SYNP62.558e-1950.00Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_SYNE72.558e-1950.00Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_NATPD2.558e-1950.00Gamma-glutamyl phosphate reductase OS=Natronomonas... [more]
PROA_NOSP73.340e-1950.00Gamma-glutamyl phosphate reductase OS=Nostoc punct... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
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