CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ANASP (Gamma-glutamyl phosphate reductase OS=Anabaena sp. (strain PCC 7120) GN=proA PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 3.340e-19
Identity = 47/96 (48.96%), Postives = 71/96 (73.96%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            + +PIGQ+  + EL  GL+L++ +CPLGVL I+FE+RP+A +QI SLAI+SGNG++LK GKEA+RS   + K +   +  T V  +++ L+T+REE
Sbjct:   94 LADPIGQVQIQRELDTGLVLKRITCPLGVLGIIFEARPEAAIQIISLAIKSGNGVILKCGKEAVRSCEAIVKAVKQGLSTTDVNPEVVQLLTTREE 189          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROMP (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=proA PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.362e-19
Identity = 47/94 (50.00%), Postives = 70/94 (74.47%), Query Frame = 2
Query:   14 EPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            +P+GQI  + EL+ GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  +   +   + D+ + E  I L+TSR++
Sbjct:  100 DPVGQIQIKRELSKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNLAIVSALKEGLQDSNLDENAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM9 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9312) GN=proA PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.698e-19
Identity = 46/97 (47.42%), Postives = 72/97 (74.23%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            D+ +P+ Q+  + ELA GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   + ++ + +  I L+TSR++
Sbjct:   97 DLADPVNQVQIKRELAKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNTAIVKALKKGLYESGLDKNAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ANAVT (Gamma-glutamyl phosphate reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=proA PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 5.698e-19
Identity = 47/96 (48.96%), Postives = 70/96 (72.92%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            + +PIGQ+  + EL  GL+L++ +CPLGVL I+FE+RP+A +QI SLAI+SGNG++LK GKEA+RS   + K +   +  T V   ++ L+T+REE
Sbjct:   94 LADPIGQVQIQRELDTGLVLKRITCPLGVLGIIFEARPEAAIQIISLAIKSGNGVILKCGKEAVRSCEAIVKAVKQGLSTTDVNPDVVQLLTTREE 189          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CYAP4 (Gamma-glutamyl phosphate reductase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=proA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.441e-19
Identity = 52/103 (50.49%), Postives = 75/103 (72.82%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS----NAILHKVITSA--IPDTVGEKLIGLVTSREE 292
            + + +PIG +  + EL  GLIL++ +CPLGVL ++FE+RPDA+VQI++LAI+SGNG+LLKGG+EA+ S     A +H+ + SA   PD+     I L+TSREE
Sbjct:   92 SQLADPIGAVQLQRELDTGLILKRMTCPLGVLGVIFEARPDAVVQISALAIKSGNGVLLKGGQEALHSCKALVAAIHQGLASAGLNPDS-----IALLTSREE 189          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: ALH13_CAEEL (Probable delta-1-pyrroline-5-carboxylate synthetase OS=Caenorhabditis elegans GN=alh-13 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.441e-19
Identity = 47/98 (47.96%), Postives = 71/98 (72.45%), Query Frame = 2
Query:   11 EEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKL---IGLVTSREEI 295
            E  +G++LK+ ++++GL LE+ + P+G L+++FESRPD L Q+ASLA+ SGN LLLKGGKEA  SN  LH ++  A+  T G ++   + LV SRE++
Sbjct:  440 ETLVGRVLKKVKISEGLFLEQVTVPIGSLMVIFESRPDCLPQVASLAMASGNALLLKGGKEAEESNKALHALVQEAL-GTHGFEMRDAVTLVRSREDV 536          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM2 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9215) GN=proA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.269e-18
Identity = 46/97 (47.42%), Postives = 71/97 (73.20%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            D+ +P+ Q+  + EL+ GLILE+ + P+GVL I+FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   + ++ +    I L+TSR++
Sbjct:   97 DLADPVNQVQIKKELSKGLILERKTVPIGVLGIIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNTSIVKALQEGLNESGLDRNAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM0 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9301) GN=proA PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 1.269e-18
Identity = 45/97 (46.39%), Postives = 73/97 (75.26%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            ++ +P+ QI  + EL++GLILE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   + ++ + +  I L+TSR++
Sbjct:   97 ELADPVNQIQIKRELSNGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVILKGGSEANLTNTSIVKALQEGLDESGLDKNAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_THEEB (Gamma-glutamyl phosphate reductase OS=Thermosynechococcus elongatus (strain BP-1) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.658e-18
Identity = 50/99 (50.51%), Postives = 65/99 (65.66%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREEI 295
            A + +P+GQ     EL  GLIL + +CPLGVL ++FE+RPDA+VQIASLAI+SGNG +LKGG+EA RS   I+  +        V    I L+T R EI
Sbjct:   96 AALPDPLGQRQLHRELDTGLILSRVTCPLGVLGVIFEARPDAVVQIASLAIKSGNGAILKGGQEASRSCQTIMQTIHRGLEKSAVPAGAIALLTQRSEI 194          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROMT (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL2A) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.658e-18
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREE 292
            +++ +PIG+     EL + LILE+ + PLGVL ++FESRPDAL+QIASLA+RSGNG LLKGG EA  +N AI+  +        VG   + L+T+R+E
Sbjct:   96 SNLADPIGKRQLHRELNENLILERVTVPLGVLGVIFESRPDALIQIASLAVRSGNGALLKGGSEAKDTNQAIMDSLDKGLRKANVGSGALSLLTTRQE 193          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_ANASP3.340e-1948.96Gamma-glutamyl phosphate reductase OS=Anabaena sp.... [more]
PROA_PROMP4.362e-1950.00Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM95.698e-1947.42Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_ANAVT5.698e-1948.96Gamma-glutamyl phosphate reductase OS=Anabaena var... [more]
PROA_CYAP47.441e-1950.49Gamma-glutamyl phosphate reductase OS=Cyanothece s... [more]
ALH13_CAEEL7.441e-1947.96Probable delta-1-pyrroline-5-carboxylate synthetas... [more]
PROA_PROM21.269e-1847.42Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM01.269e-1846.39Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_THEEB1.658e-1850.51Gamma-glutamyl phosphate reductase OS=Thermosynech... [more]
PROA_PROMT1.658e-1850.00Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
back to top