CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10366 contig Csv1_Contig10366:219..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM5 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=proA PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.658e-18
Identity = 47/97 (48.45%), Postives = 71/97 (73.20%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREE 292
            D+ +P+GQI  + EL+ GLILE+ + P+GVL ++FESRPDA++QI+SLAIR+GNG++LKGG EA  +N AI+  +        + +  I L+TSR++
Sbjct:   97 DLSDPLGQIQIKKELSKGLILERKTVPIGVLGVIFESRPDAVMQISSLAIRAGNGVMLKGGSEANFTNQAIVSALKKGLQKSNIDDNAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM1 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain NATL1A) GN=proA PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.165e-18
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREE 292
            +++ +PIG+     EL + LILE+ + PLGVL ++FESRPDAL+QIASLA+RSGNG LLKGG EA  +N +I+  +        VG   + L+T+R+E
Sbjct:   96 SNLADPIGKRQLHRELDENLILERVTVPLGVLGVIFESRPDALIQIASLAVRSGNGALLKGGSEAKDTNQSIMDSLDKGLRKSNVGSGALSLLTTRQE 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOCE (Gamma-glutamyl phosphate reductase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=proA PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.693e-18
Identity = 48/97 (49.48%), Postives = 69/97 (71.13%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSA-IPDTVGEKLIGLVTSREEI 295
            +EEPIG+ L   +L D L L K +CP+GV+ I+FESRPDALVQI++L ++SGN +LLKGG EA  +N +L  VI  A +   + +  IGL+ SR+++
Sbjct:   87 LEEPIGKTLLANKLDDELELYKVTCPIGVIGIIFESRPDALVQISTLCLKSGNCVLLKGGSEAKETNRVLTGVIEEATVAAGLPKGWIGLLESRDDV 183          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_HALWD (Gamma-glutamyl phosphate reductase OS=Haloquadratum walsbyi (strain DSM 16790) GN=proA PE=3 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 4.823e-18
Identity = 46/98 (46.94%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEKLIGLVTSREEI 295
            A+ ++P+G+ L   EL D L L K + P+GV+  VFESRPDALVQI++L+++SGN ++LKGG EA RSN +L+  I  A P+ V      L+ +RE++
Sbjct:   98 AEQDDPLGETLTARELDDDLNLYKVTVPIGVIGTVFESRPDALVQISALSLKSGNAVILKGGSEAERSNRVLYNCILEATPE-VPSGWAQLIEAREDV 194          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_TRIEI (Gamma-glutamyl phosphate reductase OS=Trichodesmium erythraeum (strain IMS101) GN=proA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.299e-18
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            A + +PIG +    EL  GLIL++ +CPLGV+ +VFE+RPDA++QI++LAI+SGNG++LKGGKEA  S   L   I   +  T V    + L+T+REE
Sbjct:   89 ATLRDPIGVVQIHRELDAGLILKRITCPLGVIGVVFEARPDAVIQISALAIKSGNGVILKGGKEATNSCLELVTAIRQGLSTTSVNPDGVQLLTTREE 186          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SCHPO (Probable gamma-glutamyl phosphate reductase OS=Schizosaccharomyces pombe GN=pro1 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.299e-18
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI-PDTVGEKLIGLVTSREEI 295
            + +P+G++     L DGL L K SCP+G+LL++FE+RP+ ++ I SLAI+SGN ++LKGG E+ +S A L  V+ SA+    V +  + LV SREE+
Sbjct:   92 LPDPLGRVTYARSLDDGLDLYKVSCPVGLLLVIFEARPEVIINITSLAIKSGNAVVLKGGTESAKSFAALSNVVRSALGKSKVPQAAVQLVQSREEV 188          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROM3 (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=proA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 6.299e-18
Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            A + +P+G      EL   L+LE+ + PLGVL ++FE+RPDA++QIASLAIRSGNG LLKGG EA  +N  + + + + + +T +  + I L+T+R+E
Sbjct:   96 AQLSDPLGLRQLHRELDQDLVLERITVPLGVLGVIFEARPDAVIQIASLAIRSGNGALLKGGSEASHTNQAIIEALKNGLAETEIDPEAIALLTTRQE 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SYNS3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain CC9311) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.227e-18
Identity = 45/98 (45.92%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSN-AILHKVITSAIPDTVGEKLIGLVTSREE 292
            + +++P+G      ELADGL+LE+ + PLGVL ++FE+RPDA++QIA+LAIRSGNG +LKGG EA  +N A++  +       +V    + L+T+R E
Sbjct:   95 SSLQDPLGARQLHRELADGLVLERVTVPLGVLGVIFEARPDAVIQIAALAIRSGNGAILKGGSEAKCTNQAVMQSLKEGLAGTSVSVDALDLLTTRAE 192          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROMS (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus (strain AS9601) GN=proA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.227e-18
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI-PDTVGEKLIGLVTSREE 292
            D+ +P+ Q+  + EL+ GL LE+ + P+GVL ++FESRPDA++QI+SLAIRSGNG++LKGG EA  +N  + K +   +    + +  I L+TSR++
Sbjct:   97 DLADPVNQVQIKRELSKGLFLERKTVPIGVLGVIFESRPDAVMQISSLAIRSGNGVMLKGGSEANLTNTAIVKALQEGLNASGLDKNAICLLTSRKD 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SYNR3 (Gamma-glutamyl phosphate reductase OS=Synechococcus sp. (strain RCC307) GN=proA PE=3 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.833e-17
Identity = 48/98 (48.98%), Postives = 68/98 (69.39%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRS-NAILHKVITSAIPDTVGEKLIGLVTSREE 292
            A + +P+ Q      L +GL+LE+ S PLGV+ ++FE+RPDA++QIA+LAIRSGNG +LKGG+EA RS +AIL  +        V   ++ L+TSREE
Sbjct:  103 AQLPDPLAQRQLHRALDEGLVLERISVPLGVVGVIFEARPDAVMQIAALAIRSGNGAILKGGREANRSCSAILAALQQGLARSAVHPDVLTLLTSREE 200          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_PROM51.658e-1848.45Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_PROM12.165e-1848.98Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_CLOCE3.693e-1849.48Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_HALWD4.823e-1846.94Gamma-glutamyl phosphate reductase OS=Haloquadratu... [more]
PROA_TRIEI6.299e-1848.98Gamma-glutamyl phosphate reductase OS=Trichodesmiu... [more]
PROA_SCHPO6.299e-1845.36Probable gamma-glutamyl phosphate reductase OS=Sch... [more]
PROA_PROM36.299e-1845.92Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNS38.227e-1845.92Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]
PROA_PROMS8.227e-1845.36Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_SYNR31.833e-1748.98Gamma-glutamyl phosphate reductase OS=Synechococcu... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
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