CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOK5 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=proA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.741e-11
Identity = 28/76 (36.84%), Postives = 51/76 (67.11%), Query Frame = 2 
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 229
            A + +PIG++ +  + ++ L + +   PLG + I++E+RP+  V  A+L ++SGN ++LKGGKEA+ SN  ++  I
Sbjct:   89 ASLPDPIGEVTRMWKKSNELNIGRVRVPLGTIGIIYEARPNVTVDAAALCVKSGNSVILKGGKEAINSNLAIYNAI 164
[Close]
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOK1 (Gamma-glutamyl phosphate reductase OS=Clostridium kluyveri (strain NBRC 12016) GN=proA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.741e-11
Identity = 28/76 (36.84%), Postives = 51/76 (67.11%), Query Frame = 2 
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 229
            A + +PIG++ +  + ++ L + +   PLG + I++E+RP+  V  A+L ++SGN ++LKGGKEA+ SN  ++  I
Sbjct:   89 ASLPDPIGEVTRMWKKSNELNIGRVRVPLGTIGIIYEARPNVTVDAAALCVKSGNSVILKGGKEAINSNLAIYNAI 164
[Close]
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOB8 (Gamma-glutamyl phosphate reductase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=proA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.741e-11
Identity = 28/78 (35.90%), Postives = 51/78 (65.38%), Query Frame = 2 
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            +++PIG+++   +  +GL + +   PLGV+ I++E+RP+     A L I++GN ++L+GG EA+ SN  + K +T  I
Sbjct:   88 LQDPIGEVISMWQRPNGLQIGQKRVPLGVIGIIYEARPNVTCDAAGLCIKTGNAVILRGGSEAINSNKAIVKALTKGI 165
[Close]
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_BURVG (Gamma-glutamyl phosphate reductase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=proA PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.741e-11
Identity = 31/76 (40.79%), Postives = 49/76 (64.47%), Query Frame = 2 
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVI 229
            A + +PIG+I        G+ + +   PLGV+ I++ESRP+  +  A+L ++SGN  +L+GG EA+ SNA L K+I
Sbjct:   89 ASLADPIGEISNLKYRPSGIQVGQMRVPLGVIGIIYESRPNVTIDAAALCLKSGNATILRGGSEALESNAALAKLI 164
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_CLOK59.741e-1136.84Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_CLOK19.741e-1136.84Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_CLOB89.741e-1135.90Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_BURVG9.741e-1140.79Gamma-glutamyl phosphate reductase OS=Burkholderia... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
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