CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10366 contig Csv1_Contig10366:219..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_METBF (Gamma-glutamyl phosphate reductase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=proA PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.715e-15
Identity = 40/98 (40.82%), Postives = 61/98 (62.24%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG--EKLIGLVTSREEI 295
            +++P+G  L   EL   LIL + SCP+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA  SN  + +++  AI  T G       L+ +REEI
Sbjct:   93 LKDPVGDTLSTLELDKDLILYQVSCPIGLIGVIFESRPDVVPQVMSLCLKSGNATIFKGGSEARESNRTIFQILVKAIESTDGMPAGAFQLMETREEI 190          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_METBU (Gamma-glutamyl phosphate reductase OS=Methanococcoides burtonii (strain DSM 6242) GN=proA PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.241e-15
Identity = 38/98 (38.78%), Postives = 63/98 (64.29%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG--EKLIGLVTSREEI 295
            +E+P G+ +   EL  GL L + S P+G++ ++FESRPD + Q+ SL ++SGN  + KGG EA+ SN ++  ++  A+ DT G  +    L+ +REE+
Sbjct:   93 LEDPSGRTINTLELDKGLELYQVSSPIGLIGVIFESRPDVVPQVMSLCLKSGNATVFKGGSEALNSNRVIFNILVEALEDTPGIPKGAFQLMETREEV 190          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_YEAST (Gamma-glutamyl phosphate reductase OS=Saccharomyces cerevisiae GN=PRO2 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.991e-15
Identity = 37/103 (35.92%), Postives = 66/103 (64.08%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVGEK-----LIGLVTSREEI 295
            A++E+P+G++    EL DGL L + + P+GVLL++FESRP+ +  I +L+I+SGN  +LKGGKE++ +   + K++   I     E       + L+ +R+++
Sbjct:   87 AELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESRPEVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQLIETRQDV 189          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PROMA (Gamma-glutamyl phosphate reductase OS=Prochlorococcus marinus GN=proA PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.112e-14
Identity = 43/98 (43.88%), Postives = 64/98 (65.31%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT-VGEKLIGLVTSREE 292
            A + +PIG      EL   L L++ + PLGV+ ++FESRPDA++QIASLAIRSGNG +LKGG EA  +N  + K +   +  + +  + I L+ +R+E
Sbjct:   96 ASLSDPIGIRQLHRELNTNLYLQRVTVPLGVIGVIFESRPDAVMQIASLAIRSGNGAILKGGSEASLTNIEIVKAMKEGLSKSDIQPESICLLKTRQE 193          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_DEHSC (Gamma-glutamyl phosphate reductase OS=Dehalococcoides sp. (strain CBDB1) GN=proA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            A + +P+G+I     + +GLI+ K   PLGV+  ++ESRP+  V IASL +++GN ++L+GGKE + SN IL K+I  A+
Sbjct:   90 AALPDPVGEIFDMNTMPNGLIIGKKRVPLGVIAAIYESRPNVTVDIASLCLKAGNAVILRGGKETIHSNTILAKLIRQAV 169          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_DEHSB (Gamma-glutamyl phosphate reductase OS=Dehalococcoides sp. (strain BAV1) GN=proA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.452e-14
Identity = 35/80 (43.75%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            A + +P+G+I     + +GLI+ K   PLGV+  ++ESRP+  V IASL +++GN ++L+GGKE + SN IL K+I  A+
Sbjct:   90 AALPDPVGEIFDMNTMPNGLIIGKKRVPLGVIAAIYESRPNVTVDIASLCLKAGNAVILRGGKETIHSNTILAKLIRQAV 169          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_HAEPS (Gamma-glutamyl phosphate reductase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=proA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.519e-14
Identity = 33/80 (41.25%), Postives = 57/80 (71.25%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            A + +P+GQ++    L  GL +E+   PLGV+L ++E+RP+  + +ASL +++GN ++L+GGKE   +NAIL +V+ SA+
Sbjct:   85 ASLADPVGQVIDGGVLDSGLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAILVEVVQSAL 164          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_SODGM (Gamma-glutamyl phosphate reductase OS=Sodalis glossinidius (strain morsitans) GN=proA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 33/80 (41.25%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 247
            + +P+GQ++    L  GL LE+   PLGV+ +++E+RP+  V +A+L +++GN ++L+GGKE  R+NA   KVI  A+ D
Sbjct:   86 LTDPVGQVIDGQRLDSGLSLERRRVPLGVVGVIYEARPNVTVDVAALCLKTGNAVILRGGKETYRTNAATVKVIQQALTD 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_DEHE1 (Gamma-glutamyl phosphate reductase OS=Dehalococcoides ethenogenes (strain 195) GN=proA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 7.207e-14
Identity = 32/82 (39.02%), Postives = 56/82 (68.29%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 247
            A + +P+G+I     + +GL++ K   PLGV+  ++ESRP+  V IA+L +++GN ++L+GGKE + SN IL ++I  A+ +
Sbjct:   90 AALPDPVGEIFDMNTMPNGLVIGKKRVPLGVIAAIYESRPNVTVDIAALCLKAGNAVILRGGKETIHSNTILARLIRQAVEE 171          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_PECCP (Gamma-glutamyl phosphate reductase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=proA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13
Identity = 32/78 (41.03%), Postives = 56/78 (71.79%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            + +P+GQ++  + L +GL LE+   PLGV+ +++E+RP+  + +ASL +++GN ++L+GGKE  R+NA   KVI  A+
Sbjct:   86 LTDPVGQVIDGSMLDNGLKLERRRVPLGVVGVIYEARPNVTIDVASLCLKTGNAVILRGGKETYRTNAATVKVIQQAL 163          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_METBF1.715e-1540.82Gamma-glutamyl phosphate reductase OS=Methanosarci... [more]
PROA_METBU2.241e-1538.78Gamma-glutamyl phosphate reductase OS=Methanococco... [more]
PROA_YEAST4.991e-1535.92Gamma-glutamyl phosphate reductase OS=Saccharomyce... [more]
PROA_PROMA1.112e-1443.88Gamma-glutamyl phosphate reductase OS=Prochlorococ... [more]
PROA_DEHSC1.452e-1443.75Gamma-glutamyl phosphate reductase OS=Dehalococcoi... [more]
PROA_DEHSB1.452e-1443.75Gamma-glutamyl phosphate reductase OS=Dehalococcoi... [more]
PROA_HAEPS5.519e-1441.25Gamma-glutamyl phosphate reductase OS=Haemophilus ... [more]
PROA_SODGM7.207e-1441.25Gamma-glutamyl phosphate reductase OS=Sodalis glos... [more]
PROA_DEHE17.207e-1439.02Gamma-glutamyl phosphate reductase OS=Dehalococcoi... [more]
PROA_PECCP1.606e-1341.03Gamma-glutamyl phosphate reductase OS=Pectobacteri... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
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