CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10366 contig Csv1_Contig10366:219..557. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ERWCT (Gamma-glutamyl phosphate reductase OS=Erwinia carotovora subsp. atroseptica GN=proA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.606e-13
Identity = 32/78 (41.03%), Postives = 56/78 (71.79%), Query Frame = 2
Query:    8 MEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            + +P+GQ++  + L +GL LE+   PLGV+ +++E+RP+  + +ASL +++GN ++L+GGKE  R+NA   KVI  A+
Sbjct:   86 LTDPVGQVIDGSMLDNGLKLERRRVPLGVVGVIYEARPNVTIDVASLCLKTGNAVILRGGKETYRTNAATVKVIQQAL 163          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ACTPJ (Gamma-glutamyl phosphate reductase OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=proA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.097e-13
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG 256
            A + +P+GQ++    L  GL +E+   PLGV+L ++E+RP+  + +ASL +++GN ++L+GGKE   +NA+L +V+  A+ +T G
Sbjct:   85 AKLADPVGQVIDGGVLNSGLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVEVVQQAL-ETAG 168          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ACTP7 (Gamma-glutamyl phosphate reductase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=proA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.097e-13
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG 256
            A + +P+GQ++    L  GL +E+   PLGV+L ++E+RP+  + +ASL +++GN ++L+GGKE   +NA+L +V+  A+ +T G
Sbjct:   85 AKLADPVGQVIDGGVLNSGLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVEVVQQAL-ETAG 168          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ACTP2 (Gamma-glutamyl phosphate reductase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=proA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.097e-13
Identity = 33/85 (38.82%), Postives = 59/85 (69.41%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDTVG 256
            A + +P+GQ++    L  GL +E+   PLGV+L ++E+RP+  + +ASL +++GN ++L+GGKE   +NA+L +V+  A+ +T G
Sbjct:   85 AKLADPVGQVIDGGVLNSGLKIERQRVPLGVILTIYEARPNVTIDVASLCLKTGNAVILRGGKETKFTNAVLVEVVQQAL-ETAG 168          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_ACIBL (Gamma-glutamyl phosphate reductase OS=Acidobacteria bacterium (strain Ellin345) GN=proA PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.097e-13
Identity = 35/84 (41.67%), Postives = 56/84 (66.67%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKV--ITSAIPD 247
            A + +P+G+ L   E  +GL + K   PLGV+ I++E+RP+  + +  LA++SGN ++L+GGKEA+RSN  L K+   T  +PD
Sbjct:   82 AALADPVGETLAEWERPNGLRIRKVRVPLGVVAIIYEARPNVTIDVIGLALKSGNAVVLRGGKEAVRSNECLVKIAGATPGMPD 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_NOVAD (Gamma-glutamyl phosphate reductase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=proA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.739e-13
Identity = 28/82 (34.15%), Postives = 54/82 (65.85%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 247
            A + +P+G+++      +G++L++   P+GV+ I++ESRP+     A+L +RSGN  +L+GG EA+ SN  +HK + + + +
Sbjct:   98 AGLADPVGEVISEAARPNGMVLQRVRIPVGVIGIIYESRPNVTADAAALCVRSGNAAILRGGSEAVHSNRAIHKALVAGLAE 179          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_LEPBP (Gamma-glutamyl phosphate reductase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=proA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.739e-13
Identity = 34/82 (41.46%), Postives = 56/82 (68.29%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT 250
            ++ +P+G++++ T L +GL L     P+GV++ +FESRP+ +V IASL+ +SGN  +L+GG EA  SN IL  +   AI ++
Sbjct:   92 NLPDPVGEVVRGTILPNGLELLTKRVPIGVVMTIFESRPNVIVDIASLSFKSGNACILRGGSEAYHSNLILSSLFHQAIGES 173          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_LEPBA (Gamma-glutamyl phosphate reductase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=proA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.739e-13
Identity = 34/82 (41.46%), Postives = 56/82 (68.29%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT 250
            ++ +P+G++++ T L +GL L     P+GV++ +FESRP+ +V IASL+ +SGN  +L+GG EA  SN IL  +   AI ++
Sbjct:   92 NLPDPVGEVVRGTILPNGLELLTKRVPIGVVMTIFESRPNVIVDIASLSFKSGNACILRGGSEAYHSNLILSSLFHQAIGES 173          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_CLOAB (Gamma-glutamyl phosphate reductase OS=Clostridium acetobutylicum GN=proA PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.739e-13
Identity = 32/80 (40.00%), Postives = 57/80 (71.25%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            + +++PIG+++K  +  D L + +   PLGV+ I++E+RP+  V  A+L I+SGN ++L+GGKEA+ SN  + K+I +A+
Sbjct:   89 SSLQDPIGEVIKMWKTPDELQIGQMRVPLGVIGIIYEARPNVTVDAAALCIKSGNSVILRGGKEAINSNTAIAKIIKNAV 168          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_AQUAE (Gamma-glutamyl phosphate reductase OS=Aquifex aeolicus GN=proA PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.739e-13
Identity = 34/83 (40.96%), Postives = 56/83 (67.47%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPDT 250
            A + +P+G+I+K   L +GL + +   PLGV+ IV+ESRP+  ++ +SL ++S N ++L+GGKEA+ SN  L  +I  A  +T
Sbjct:   86 ASLPDPVGEIIKMWNLPNGLKVGRMRVPLGVIFIVYESRPNVTIEASSLCMKSSNAVILRGGKEAINSNKALVNLIKEACRET 168          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_ERWCT1.606e-1341.03Gamma-glutamyl phosphate reductase OS=Erwinia caro... [more]
PROA_ACTPJ2.097e-1338.82Gamma-glutamyl phosphate reductase OS=Actinobacill... [more]
PROA_ACTP72.097e-1338.82Gamma-glutamyl phosphate reductase OS=Actinobacill... [more]
PROA_ACTP22.097e-1338.82Gamma-glutamyl phosphate reductase OS=Actinobacill... [more]
PROA_ACIBL2.097e-1341.67Gamma-glutamyl phosphate reductase OS=Acidobacteri... [more]
PROA_NOVAD2.739e-1334.15Gamma-glutamyl phosphate reductase OS=Novosphingob... [more]
PROA_LEPBP2.739e-1341.46Gamma-glutamyl phosphate reductase OS=Leptospira b... [more]
PROA_LEPBA2.739e-1341.46Gamma-glutamyl phosphate reductase OS=Leptospira b... [more]
PROA_CLOAB2.739e-1340.00Gamma-glutamyl phosphate reductase OS=Clostridium ... [more]
PROA_AQUAE2.739e-1340.96Gamma-glutamyl phosphate reductase OS=Aquifex aeol... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
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