CF504559

Overview
NameCF504559
Unique NameCF504559
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length339
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_METSB (Gamma-glutamyl phosphate reductase OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=proA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13
Identity = 29/80 (36.25%), Postives = 55/80 (68.75%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            A + +P+G++L R E  +GL++E+ + PLGV+ I++ESRP       +L +++GN  +L+GG E++RS A++H  + + +
Sbjct:   99 AALPDPVGRVLARFERPNGLVIERVAVPLGVIGIIYESRPAVTADAGALCLKAGNAAILRGGSESLRSAALIHDCLVAGL 178          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_KLEP7 (Gamma-glutamyl phosphate reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=proA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13
Identity = 32/81 (39.51%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 247
            ++ +P+GQ++    L  GL +E+   PLGV+ +++E+RP+  V +ASL +++GN  +L+GGKE  R+NA   KVI  A+ +
Sbjct:   85 NLADPVGQVIDGGLLDSGLRIERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVKVIQQALQE 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_KLEP3 (Gamma-glutamyl phosphate reductase OS=Klebsiella pneumoniae (strain 342) GN=proA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 6.101e-13
Identity = 32/81 (39.51%), Postives = 55/81 (67.90%), Query Frame = 2
Query:    5 DMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAIPD 247
            ++ +P+GQ++    L  GL +E+   PLGV+ +++E+RP+  V +ASL +++GN  +L+GGKE  R+NA   KVI  A+ +
Sbjct:   85 NLADPVGQVIDGGLLDSGLRIERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAAILRGGKETWRTNAATVKVIQQALQE 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRPZ (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRPM (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M28 GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRPG (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRPC (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRPB (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRP8 (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M18 GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
BLAST of CF504559 vs. ExPASy Swiss-Prot
Match: PROA_STRP6 (Gamma-glutamyl phosphate reductase OS=Streptococcus pyogenes serotype M6 GN=proA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 7.969e-13
Identity = 34/80 (42.50%), Postives = 54/80 (67.50%), Query Frame = 2
Query:    2 ADMEEPIGQILKRTELADGLILEKTSCPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAMRSNAILHKVITSAI 241
            AD+ +PIGQ++K     DGL + +   PLGV+ ++FESRP+  V   SLA ++ N ++L+GGK+A+ SN  L K+I  ++
Sbjct:   86 ADLADPIGQVIKGYTNLDGLKILQKRVPLGVIAMIFESRPNVSVDAFSLAFKTNNAIILRGGKDALHSNKALVKLIRQSL 165          
The following BLAST results are available for this feature:
BLAST of CF504559 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 314
Match NameE-valueIdentityDescription
PROA_METSB6.101e-1336.25Gamma-glutamyl phosphate reductase OS=Methylocella... [more]
PROA_KLEP76.101e-1339.51Gamma-glutamyl phosphate reductase OS=Klebsiella p... [more]
PROA_KLEP36.101e-1339.51Gamma-glutamyl phosphate reductase OS=Klebsiella p... [more]
PROA_STRPZ7.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRPM7.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRPG7.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRPC7.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRPB7.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRP87.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]
PROA_STRP67.969e-1342.50Gamma-glutamyl phosphate reductase OS=Streptococcu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-048 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504559 ID=CF504559; Name=CF504559; organism=Citrus sinensis; type=EST; length=339bp
TGCAGACATGGAAGAACCCATTGGTCAAATTTTAAAGAGAACAGAGCTTG
CGGATGGACTCATCCTGGAGAAAACATCATGTCCTTTGGGCGTCCTCTTG
ATAGTATTTGAATCTCGACCTGATGCCCTGGTCCAGATAGCTTCATTGGC
CATTCGGAGTGGAAATGGTCTACTACTGAAAGGAGGAAAAGAAGCTATGC
GGTCAAATGCAATCTTGCACAAGGTCATCACCTCAGCTATCCCAGATACT
GTTGGTGAGAAACTTATTGGACTTGTGACTTCCAGGGAAGAGATTCCTGA
TTTGCTCAAGCTTGATGATGTGATAGATCTTGTTATCCC
back to top