CF504561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX1_MEDTR (Auxin transporter-like protein 1 OS=Medicago truncatula GN=LAX1 PE=2 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 1.340e-36 Identity = 71/82 (86.59%), Postives = 74/82 (90.24%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP +V YFTGATNILYTFGGHAVTVEIMHAMWKPQKFK+IY ATLYVFTLT+PSA AVYWAFGDQLL HSNAFSLL Sbjct: 223 VVHSGPKKMVWYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYFFATLYVFTLTLPSAIAVYWAFGDQLLDHSNAFSLL 304
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX3_ORYSJ (Auxin transporter-like protein 3 OS=Oryza sativa subsp. japonica GN=Os10g0147400 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 6.652e-36 Identity = 68/82 (82.93%), Postives = 77/82 (93.90%), Query Frame = 3 Query: 3 VTHSGPSTLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 V HSGP+++VLYFTGATNILYTFGGHAVTVEIMHAMW+PQKFK+IYLLAT+YV TLT+PSA+A YWAFGD LLTHSNA +LL Sbjct: 239 VAHSGPTSIVLYFTGATNILYTFGGHAVTVEIMHAMWRPQKFKAIYLLATVYVLTLTLPSASAAYWAFGDALLTHSNALALL 320
BLAST of CF504561 vs. ExPASy Swiss-Prot
Match: LAX4_ORYSJ (Putative auxin transporter-like protein 4 OS=Oryza sativa subsp. japonica GN=Os11g0169200 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 3.416e-32 Identity = 65/80 (81.25%), Postives = 73/80 (91.25%), Query Frame = 3 Query: 12 SGPS-TLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVFTLTIPSAAAVYWAFGDQLLTHSNAFSLL 248 +GPS T+VLYFTGATNILYTFGGHAVTVEIMHAMW+P++FK IYL AT YV TLT+PSAAA+YWAFGD LL HSNAF+LL Sbjct: 235 AGPSKTMVLYFTGATNILYTFGGHAVTVEIMHAMWRPRRFKMIYLAATAYVLTLTLPSAAAMYWAFGDALLDHSNAFALL 314 The following BLAST results are available for this feature:
BLAST of CF504561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF504561 ID=CF504561; Name=CF504561; organism=Citrus sinensis; type=EST; length=252bpback to top |