CF504563
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_THEAC (50S ribosomal protein L10e OS=Thermoplasma acidophilum GN=rpl10e PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 4.995e-17 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 1 Query: 124 PIPRSESTMSG*RRKASTSSPSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQE 495 P P+ + + G ++K P LV+ E + ALEAAR++ N+ M + AG D F+L+V +P HVLR +KM + AGADR+ +GMR AFG+P GT ARV V++ R ++ HA+E Sbjct: 27 PYPKITTFVQGNQKK---DFPIEMRLVAEEPCQIRHTALEAARVSVNRRMTEAAGLDYFYLKVVPYPHHVLREHKMATGAGADRISSGMRAAFGRPVGTAARVYPDDVIMIARTDEA---HAKE 144
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_METHJ (50S ribosomal protein L10e OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=rpl10e PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 7.326e-17 Identity = 41/92 (44.57%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSV 459 P +LV E + ALEAAR++ N+ + K G+ +HL++R +P HVLR NK + AGADR+ GMR AFGK GT AR Q + +V Sbjct: 44 PMEVSLVVDESCQIRHSALEAARMSINRKLNKELGRMNYHLKLRTYPHHVLRENKQATGAGADRVSQGMRLAFGKAVGTAARCQQNQKIFTV 135 HSP 2 Score: 30.8018 bits (68), Expect = 7.326e-17 Identity = 12/37 (32.43%), Postives = 20/37 (54.05%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVG 155 M R+P YR + K Y + + G+P K+ +D+G Sbjct: 1 MVRKPNSMYRNLAKKAYTRKEYMGGIPGVKVVHFDMG 37
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_HALSA (50S ribosomal protein L10e OS=Halobacterium salinarium GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.237e-16 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCK 468 P +LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ Sbjct: 47 PVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCE 141 HSP 2 Score: 33.4982 bits (75), Expect = 1.237e-16 Identity = 14/47 (29.79%), Postives = 24/47 (51.06%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFP 185 M +PA YR+I Y + + G+P KI + +G + D++P Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYP 47
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_HALS3 (50S ribosomal protein L10e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.237e-16 Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCK 468 P +LV E+ + +LEAAR++ N+++ K G+ + +++R P ++R NK + AGADR+ GMR AFG P GT AR+ G L + C+ Sbjct: 47 PVQISLVPQEECQLRHGSLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGAGADRVSDGMRQAFGVPVGTAARIQPGDQLFTAYCE 141 HSP 2 Score: 33.4982 bits (75), Expect = 1.237e-16 Identity = 14/47 (29.79%), Postives = 24/47 (51.06%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFP 185 M +PA YR+I Y + + G+P KI + +G + D++P Sbjct: 1 MSEKPASMYRKIDKPSYTRRDYVTGIPGSKIAQHKMGDLQADADDYP 47
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_HALWD (50S ribosomal protein L10e OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl10e PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.608e-16 Identity = 37/104 (35.58%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQE 495 P +L E+ + +LE+AR++ N+ M K G+D + + +R P +LR NK + AGADR+ GMR AFGKP GT AR+ + + ++ C+ ++ A++ Sbjct: 47 PVQISLRIEEECQIRHGSLESARLSANRTMLKQVGQDNYKMVLRKFPHQILRENKQATGAGADRVSDGMRQAFGKPVGTAARIQQNERVFTIYCEVDDASVAKD 150 HSP 2 Score: 33.113 bits (74), Expect = 1.608e-16 Identity = 13/47 (27.66%), Postives = 25/47 (53.19%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFP 185 M +PA YR++ Y + + G+P KI +++G + G ++P Sbjct: 1 MSDKPASMYRKLSKPSYTRRDYVTGIPGSKIAQHNMGNLQTGPQDYP 47
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_METST (50S ribosomal protein L10e OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl10e PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 2.096e-16 Identity = 43/98 (43.88%), Postives = 63/98 (64.29%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLS--VRCKD 471 P TL E ++S +LEAARIA N+Y+ + GK + L++R +P H++R N M + AGADR+Q+GMRGAFGK + A V Q +++ V+ KD Sbjct: 32 PLEVTLAVKEHTHLSHNSLEAARIAANRYLQRTTGKLGYRLKIRTYPHHIVRENPMATGAGADRVQSGMRGAFGKAVSSEALVRANQKIITAYVQVKD 129 HSP 2 Score: 23.8682 bits (50), Expect = 2.096e-16 Identity = 9/23 (39.13%), Postives = 14/23 (60.87%), Query Frame = 3 Query: 87 KPYPKSRFCRGVPDPKIRIYDVG 155 +PY + + R +P KI YD+G Sbjct: 3 RPYTRKDYIRKIPASKIVQYDMG 25
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_CALMQ (50S ribosomal protein L10e OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl10e PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.479e-16 Identity = 52/123 (42.28%), Postives = 68/123 (55.28%), Query Frame = 1 Query: 127 IPRSESTMSG*RRKASTSSPSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQE 495 IPR E M + K S L E + ALEAAR KY++K F+L++ +P HV+R NKML+ AGADRLQ GMR AFG P G ++ G+VL+ V +D N HA+E Sbjct: 30 IPRFE--MGATKAKDRERFTSVAVLRVLEGGQIRVNALEAARQMAYKYLSKVLTDQNFYLKIIKYPHHVIRENKMLAMAGADRLQEGMRLAFGVPTGRAIQIEPGEVLMIVEVEDRNITHAKE 150
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_PICTO (50S ribosomal protein L10e OS=Picrophilus torridus GN=rpl10e PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 2.741e-15 Identity = 45/119 (37.82%), Postives = 71/119 (59.66%), Query Frame = 1 Query: 124 PIPRSESTMSG*RRKASTSSPSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNS 480 P P+ + + G ++K LV+ E + ALEAAR++ N+ + AG D + L++R +P V+R +KM + AGADR+ +GMR AFG+P GT ARV GQ+++ R +N+ Sbjct: 27 PYPKITTFIQGNQKK---DFEIEMMLVAEEACQIRHTALEAARVSVNRKLLDAAGSDNYFLQIRPYPHQVIREHKMATGAGADRISSGMRAAFGRPVGTAARVYPGQIIMVGRVDRNNA 142
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_HALLT (50S ribosomal protein L10e OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=rpl10e PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 1.801e-14 Identity = 33/94 (35.11%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 184 PSAFTLVSWEKENVSSEALEAARIACNKYMAKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRC 465 P +L E+ + +LE++R++ N+++ K G+ + + +R P V+R NK + AGADR+ GMR AFGKP GT AR+ ++ + C Sbjct: 47 PVQISLRVEEELQIRHGSLESSRLSANRHLIKELGEGNYKMTLRKFPHQVIRENKQATGAGADRVSDGMRQAFGKPVGTAARLNKDDIVFTAYC 140 HSP 2 Score: 31.9574 bits (71), Expect = 1.801e-14 Identity = 14/47 (29.79%), Postives = 23/47 (48.94%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFP 185 M +PA YR I Y + + G+P KI +++G D++P Sbjct: 1 MSDKPASMYRTIDKPSYTRREYITGIPGSKIAQHNMGDLSAEPDDYP 47
BLAST of CF504563 vs. ExPASy Swiss-Prot
Match: RL10_NATPD (50S ribosomal protein L10e OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=rpl10e PE=3 SV=1) HSP 1 Score: 66.2402 bits (160), Expect = 6.670e-14 Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 1 Query: 196 TLVSWEKENVSSEALEAARIACNKYMAKYAGKDA-FHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVAIGQVLLSVRCKDSNSHHAQE 495 +L+ E+ + +LEA+R++ N+ M K G+D + + +R P V+R NK + AGADR+ GMR AFGK GT AR+ G+ + ++ C ++ A++ Sbjct: 51 SLIVDEEVQIRHGSLEASRLSANRRMLKELGEDGDYKMILRKFPHQVIRENKQATGAGADRVSDGMRQAFGKIVGTAARINKGERVFTIWCHPEDADAAKD 151 HSP 2 Score: 30.0314 bits (66), Expect = 6.670e-14 Identity = 12/37 (32.43%), Postives = 18/37 (48.65%), Query Frame = 3 Query: 45 MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVG 155 M +PA YR I Y + + G+P K+ Y +G Sbjct: 1 MSDKPASMYRDIDKPAYTRREYITGIPGSKVAQYKMG 37 The following BLAST results are available for this feature:
BLAST of CF504563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504563 ID=CF504563; Name=CF504563; organism=Citrus sinensis; type=EST; length=497bpback to top |