CF504573

Overview
NameCF504573
Unique NameCF504573
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length350
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL14_MOUSE (ADP-ribosylation factor-like protein 14 OS=Mus musculus GN=Arl14 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.155e-25
Identity = 53/114 (46.49%), Postives = 84/114 (73.68%), Query Frame = 1
Query:   13 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD-SNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            K+  IL++GLD+AGK+T+LY+LK  E + TIPTIGFNVE V+ + +++ TVWDVGGQ+K+R +W  Y +N QGL++VVD S  + R+ ++R E   +L  + +++  +++ ANK
Sbjct:   12 KQAHILLLGLDSAGKSTLLYRLKFAETLATIPTIGFNVEMVQLQSSLTLTVWDVGGQEKMRTVWDCYCENAQGLMYVVDCSEGKKRLEDSRKEFKHILKNEHIKNTPVVILANK 125          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL5_CAEEL (ADP-ribosylation factor-like protein 5 OS=Caenorhabditis elegans GN=arl-5 PE=2 SV=3)

HSP 1 Score: 112.849 bits (281), Expect = 5.426e-25
Identity = 53/112 (47.32%), Postives = 75/112 (66.96%), Query Frame = 1
Query:   13 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            K+ +I++VGLD AGKTTILY     + V T PTIG NVE V Y+N+ F +WD+GGQ+ +R  W  Y+  T  +I V+DS+D  R+   +++LH ML  ++L  A +LV ANK
Sbjct:   16 KKYKIIVVGLDNAGKTTILYNYVTKDQVETKPTIGSNVEEVSYRNLDFVIWDIGGQESLRKSWSTYYVQTDVVIVVIDSSDTTRIPIMKEQLHNMLQHEDLARAHILVLANK 127          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL11_MOUSE (ADP-ribosylation factor-like protein 11 OS=Mus musculus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.062e-24
Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            K E +++M+GLD+AGKTTILYKLK  ++V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANK
Sbjct:   10 KAEAQVVMMGLDSAGKTTILYKLKGNQLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELKEVLEDPNMAGVPFLVLANK 123          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL11_HUMAN (ADP-ribosylation factor-like protein 11 OS=Homo sapiens GN=ARL11 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 2.693e-24
Identity = 53/114 (46.49%), Postives = 79/114 (69.30%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            K E +++M+GLD+AGKTT+LYKLK  ++V T+PT+GFNVE ++   ++S T+WDVGGQ  +R  W+ Y + T  L++V+DS D  R+ E+  EL  +LN+  +     LV ANK
Sbjct:   10 KAEAQVVMMGLDSAGKTTLLYKLKGHQLVETLPTVGFNVEPLKAPGHVSLTLWDVGGQAPLRASWKDYLEGTDILVYVLDSTDEARLPESAAELTEVLNDPNMAGVPFLVLANK 123          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL11_BOVIN (ADP-ribosylation factor-like protein 11 OS=Bos taurus GN=ARL11 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 4.594e-24
Identity = 52/114 (45.61%), Postives = 81/114 (71.05%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            + E +++M+GLD+AGKTT+LY+LK  ++V T+PT+GFNVE +E   ++S T+WDVGGQ ++R  W+ + + T  L++V+DS D  R+ EA  EL  +L++  +    LLV ANK
Sbjct:   10 RAEAQVVMMGLDSAGKTTLLYRLKGYQLVETLPTVGFNVEPLEEPGHVSLTLWDVGGQSQLRASWKDHLEGTDILVYVLDSTDEARLPEAVAELREVLDDPSVASVPLLVLANK 123          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL5C_HUMAN (Putative ADP-ribosylation factor-like protein 5C OS=Homo sapiens GN=ARL5C PE=2 SV=4)

HSP 1 Score: 108.997 bits (271), Expect = 7.835e-24
Identity = 50/116 (43.10%), Postives = 76/116 (65.52%), Query Frame = 1
Query:    1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            +F  +E  +++VGLD  GKTTILY+    E+V   PTIG NVE +      F +WD+   + +  +W  Y+ NT+ +I V+DS DRDR++  R+EL++ML  + L+DA +L+FANK
Sbjct:   11 IFGNQEHTVIIVGLDNEGKTTILYRFLTNEVVHMCPTIGSNVEEIILPKTHFFMWDIVRPEALSFIWNTYYSNTEFIILVIDSTDRDRLLTTREELYKMLAHEALQDASVLIFANK 126          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL11_RAT (ADP-ribosylation factor-like protein 11 OS=Rattus norvegicus GN=Arl11 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.977e-23
Identity = 51/110 (46.36%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   22 RILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYK-NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            +++M+GLD AGKTTILYKLK   +V T+PT+GFNVE +E   ++S T+WD+GGQ ++R  W+ Y +    L++V+DS D  R+ EA  EL  +L +  +     LV ANK
Sbjct:   12 QVVMLGLDCAGKTTILYKLKGNRLVDTLPTVGFNVEPLEAPGHVSLTLWDIGGQTQLRATWKDYLEGIDLLVYVLDSTDEARLPEAVAELEEVLEDPNMAGVPFLVLANK 121          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL_SCHPO (ADP-ribosylation factor-like protein alp41 OS=Schizosaccharomyces pombe GN=alp41 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.889e-23
Identity = 50/113 (44.25%), Postives = 78/113 (69.03%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348
            ++E+R+L++GLD AGKTTIL  L   ++    PT GF + T+E + + FT+WD+GGQ  +R  W++YF++T+ +I+VVDS D  R+ E R+ L  +L E++L    +LV ANK
Sbjct:   14 EREVRVLLLGLDNAGKTTILKCLLNEDVNEVSPTFGFQIRTLEVEGLRFTIWDIGGQKTLRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELLVEEKLLFTSILVLANK 126          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL6_PONAB (ADP-ribosylation factor-like protein 6 OS=Pongo abelii GN=ARL6 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.633e-23
Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANK 348
            KKE+ +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANK 131          
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL6_HUMAN (ADP-ribosylation factor-like protein 6 OS=Homo sapiens GN=ARL6 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.633e-23
Identity = 54/117 (46.15%), Postives = 81/117 (69.23%), Query Frame = 1
Query:   10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANK 348
            KKE+ +L +GLD +GKTTI+ KLK     +   +PTIGF++E  +  ++SFTV+D+ GQ + R LW HY++  Q +IFV+DS+DR R+V A++EL  +LN  ++  R   +L FANK
Sbjct:   15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDRLRMVVAKEELDTLLNHPDIKHRRIPILFFANK 131          
The following BLAST results are available for this feature:
BLAST of CF504573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL14_MOUSE4.155e-2546.49ADP-ribosylation factor-like protein 14 OS=Mus mus... [more]
ARL5_CAEEL5.426e-2547.32ADP-ribosylation factor-like protein 5 OS=Caenorha... [more]
ARL11_MOUSE2.062e-2446.49ADP-ribosylation factor-like protein 11 OS=Mus mus... [more]
ARL11_HUMAN2.693e-2446.49ADP-ribosylation factor-like protein 11 OS=Homo sa... [more]
ARL11_BOVIN4.594e-2445.61ADP-ribosylation factor-like protein 11 OS=Bos tau... [more]
ARL5C_HUMAN7.835e-2443.10Putative ADP-ribosylation factor-like protein 5C O... [more]
ARL11_RAT2.977e-2346.36ADP-ribosylation factor-like protein 11 OS=Rattus ... [more]
ARL_SCHPO3.889e-2344.25ADP-ribosylation factor-like protein alp41 OS=Schi... [more]
ARL6_PONAB6.633e-2346.15ADP-ribosylation factor-like protein 6 OS=Pongo ab... [more]
ARL6_HUMAN6.633e-2346.15ADP-ribosylation factor-like protein 6 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_120000-062 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-19_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF504573 ID=CF504573; Name=CF504573; organism=Citrus sinensis; type=EST; length=350bp
CTTTTTGCTAAGAAAGAGATGAGAATTCTCATGGTAGGTCTCGATGCAGC
TGGTAAGACTACTATCCTGTACAAGCTTAAGCTCGGAGAGATCGTCACCA
CCATTCCTACCATTGGATTTAATGTAGAGACCGTTGAGTATAAGAACATC
AGCTTTACTGTCTGGGATGTCGGGGGTCAAGACAAGATCCGACCTTTGTG
GAGACATTATTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTA
ATGATCGCGACCGTGTGGTAGAAGCTAGGGATGAGTTGCACAGAATGTTG
AATGAGGATGAATTGAGAGATGCTGTGCTGCTTGTATTTGCTAACAAGCA
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