CF504573
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL6_MOUSE (ADP-ribosylation factor-like protein 6 OS=Mus musculus GN=Arl6 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.663e-23 Identity = 53/117 (45.30%), Postives = 82/117 (70.09%), Query Frame = 1 Query: 10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANK 348 KKE+ +L +GLD +GKTTI+ KLK + +PTIGF++E + ++SFTV+D+ GQ + R LW HY+++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK Sbjct: 15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIEKFKSSSLSFTVFDMSGQGRYRNLWEHYYKDGQAIIFVIDSSDKLRMVVAKEELDTLLNHPDIKHRRIPILFFANK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL6_BOVIN (ADP-ribosylation factor-like protein 6 OS=Bos taurus GN=ARL6 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 1.930e-22 Identity = 52/117 (44.44%), Postives = 81/117 (69.23%), Query Frame = 1 Query: 10 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT--IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL--RDAVLLVFANK 348 KKE+ +L +GLD +GKTTI+ KLK + +PTIGF+++ + ++SFTV+D+ GQ + R LW HY++ Q +IFV+DS+D+ R+V A++EL +LN ++ R +L FANK Sbjct: 15 KKEVHVLCLGLDNSGKTTIINKLKPSNAQSQDIVPTIGFSIQKFKSSSLSFTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDKLRMVVAKEELRTLLNHPDIKHRRIPILFFANK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARD1_CAEEL (Putative GTP-binding protein ard-1 homolog OS=Caenorhabditis elegans GN=arc-1 PE=2 SV=3) HSP 1 Score: 101.293 bits (251), Expect = 1.634e-21 Identity = 47/114 (41.23%), Postives = 75/114 (65.79%), Query Frame = 1 Query: 16 EMRILMVGLDAAGKTTILYKLKLGEIVTTI---PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 E R++++GLD AGKT+I+ +LK ++ T + PTIGFN+ET+ YKN WDVGG K+R LW+HY+ N Q + +V+D +R EA EL+R++++ + ++V N+ Sbjct: 369 ESRVVLLGLDGAGKTSIVRRLKKVQMDTVMAPHPTIGFNIETIHYKNYRLNFWDVGGLPKLRHLWKHYYSNAQAIFYVIDGYAVERFSEAIKELNRVMSDPLVGTCPVIVAVNR 482
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL8_DICDI (ADP-ribosylation factor-like protein 8 OS=Dictyostelium discoideum GN=arl8 PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.754e-21 Identity = 47/117 (40.17%), Postives = 74/117 (63.25%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVT-TIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT++ + G + TIPTIGFN++ V N++ +WD+GGQ + R +W Y + ++FVVDS DR++ +++ L ++N+ L LLV ANK Sbjct: 14 LFWKQEMELTLVGLQGSGKTTLVNVISNGGFIEDTIPTIGFNMKKVTKGNVTIKLWDIGGQPRFRSMWERYCRGVNAIVFVVDSADREKFEQSKQALQDLINKPPLAKIPLLVVANK 130
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.108e-21 Identity = 44/117 (37.61%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + ++++VD+ DR++V +R+ELH +L++ +L+ +LV NK Sbjct: 15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.383e-20 Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR+++ +R+ELH +L++ +L+ +LV NK Sbjct: 15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.383e-20 Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR+++ +R+ELH +L++ +L+ +LV NK Sbjct: 15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.383e-20 Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR+++ +R+ELH +L++ +L+ +LV NK Sbjct: 15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: SAR1B_DICDI (GTP-binding protein Sar1B OS=Dictyostelium discoideum GN=sarB PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.806e-20 Identity = 45/116 (38.79%), Postives = 79/116 (68.10%), Query Frame = 1 Query: 4 FAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLI-FVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 F KKE +I+++GL AGKTT+L+ L G + + IPT+ N E+ Y N++F +D+GGQ +R LW+ Y +++ +I F+VDS+D + ++E++ E+H +L ++ L + LL+ +K Sbjct: 16 FFKKEAKIVIIGLGNAGKTTLLHLLVTGSLKSHIPTLRPNAESFTYGNVNFKAYDLGGQQNLRFLWKQYVPDSKTIIVFMVDSSDYNSIIESKSEIHDILGDEHLSQSPLLILGSK 131
BLAST of CF504573 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 1.806e-20 Identity = 42/117 (35.90%), Postives = 75/117 (64.10%), Query Frame = 1 Query: 1 LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 348 LF K+EM + +VGL +GKTT + + G+ IPT+GFN+ V N++ +WD+GGQ + R +W Y + +++++D+ DR+++ +R+ELH +L++ +L+ +LV NK Sbjct: 15 LFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNK 131 The following BLAST results are available for this feature:
BLAST of CF504573 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >CF504573 ID=CF504573; Name=CF504573; organism=Citrus sinensis; type=EST; length=350bpback to top |